Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq9 96.9 3e-15 >seq9 Length=249065 Score = 96.9 bits (106), Expect = 3e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || || ||||||||||| |||||||| | || || | ||||||| Sbjct 144160 ACCAAGTGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGACAAAGTACGGCCATCTTCC 144101 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 || ||||| || ||| | || | | |||||| || ||| | ||||||||| || | Sbjct 144100 AACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGA 144041 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | | ||| ||| || ||| || ||||| || || | || Sbjct 144040 ATCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTAATAGTCTTC 143981 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332 || || | || || ||||| |||||||||||| || Sbjct 143980 CCAGTGAGAGTCTTCACAAATATTTGCATTTTTTAA 143945 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176 |||| |||||| || || ||||||||||| || ||||| | || || || ||||||| Sbjct 144388 ACCAAGTGAAGGGTAGACTCTTTTTGAATATTATAGTCTGACAAAGTACGACCATCTTCC 144329 Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236 || ||||| || ||| | || | | |||||| || ||| | |||||||| || | Sbjct 144328 AACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGA 144269 Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296 || | |||||| | | ||| ||| || ||| || ||||| || || | || Sbjct 144268 ATCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTAATAGTCTTC 144209 Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325 || || | || || ||||| |||||||| Sbjct 144208 CCAGTGAGAGTCTTCACAAATATTTGCAT 144180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379341998130585