Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq26 109 8e-19 >seq26 Length=183063 Score = 109 bits (120), Expect = 8e-19 Identities = 353/537 (66%), Gaps = 22/537 (4%) Strand=Plus/Minus Query 125044 AGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGGGAGA 125103 |||| || |||||||| | ||||| | ||| | || | ||| || | |||||| ||| Sbjct 77622 AGGCTTCTTTTTGGACTGCTGAAGAAATAGATTTATCGAGTGACTTGGAAGATTGGAAGA 77563 Query 125104 CTCGTTTGACTGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCT 125163 |||| || | |||||| | || || || ||| | ||||| |||||||| | Sbjct 77562 AA---TTGAATGCAGATGAGCGCCATTTCATTTCTCACGTATTGGCTTTCTTTGCATCTT 77506 Query 125164 CCGATGGAATCGTCAACGACAATCT-GTTGACACGATTCTCTCAAGAGTTGACCA--TTC 125220 |||| ||||| || || || || | || | |||| | || || || ||| ||| Sbjct 77505 CCGACGGAATTGTTTTGGAGAACCTTGCAGAAA-GATTTTGTCGTGA--TGTCCAGATTC 77449 Query 125221 CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGT 125280 |||| | || ||||| ||||| ||||| || || || | || ||||||| | Sbjct 77448 CAGAAGCACGATGTTTTTATGGATTTCAAATAGCAATGGAAAATATTCATTCGGAAACTT 77389 Query 125281 ACTCTACACTGATTGACATGTACATTCGCGATCCGCAACGTAAACACATGCTC-TTTAAC 125339 | ||| || || || | || ||||| ||| | ||| | ||| | | | ||| | Sbjct 77388 ATTCTCTTCTTATCGATACTTATATTCGAGATGCTCAA-GAAAAGGCTCGTTTATTTGAA 77330 Query 125340 GCAATCGACACGG-TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGA 125398 ||||| || ||| | || | ||| ||||||||||| |||| | | |||||| | Sbjct 77329 GCAATGGA-ACGTATTCCTTGTATTGAGAAAAAGGCTCAGTGGGCTTTAAGATGGATCCA 77271 Query 125399 TGACGACAAGTCT---TCGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCAT 125455 | ||| || | || || | | |||||||| || || |||||||| || Sbjct 77270 ATCC------TCTGCCTCTTTTGCTGAGCGTTTAGTGGCATTTGCTGCTGTAGAGGGAAT 77217 Query 125456 CTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGG 125515 || ||||| ||| |||| |||| |||||| | || ||| | ||||| ||||| || Sbjct 77216 ATTTTTTTCTGGTTCTTTTTGTTCCATATTTTGGTTGAAAAAGAGAGGACTTATGCCAGG 77157 Query 125516 ACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGC 125572 | |||| | ||| ||| |||| || || || || || | || ||||||||||| Sbjct 77156 ATTGACCTTCTCTAATGAGCTTATTTCACGTGATGAAGGTTTGCATTGTGACTTTGC 77100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741055189017080