Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq26 125 9e-24 seq8 91.5 2e-13 seq36 82.4 9e-11 >seq26 Length=183063 Score = 125 bits (138), Expect = 9e-24 Identities = 337/507 (66%), Gaps = 19/507 (4%) Strand=Plus/Plus Query 126064 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTT 126123 ||| || ||||| || || || ||||| |||||| || ||||||||| || || | ||| Sbjct 77117 ACCTTCATCACGTGAAATAAGCTCATTAGAGAAGGTCAATCCTGGCATAAGTCCTCTCTT 77176 Query 126124 CTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAA 126183 |||||||| || || | |||||| ||||| || || || |||||||| ||| || || Sbjct 77177 TTTCAACCAAAATATGGAACAAAAAGAACCAGAAAAAAATATTCCCTCTACAGCAGCAAA 77236 Query 126184 CGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTG 126243 || | | |||||||||||| ||| || | | | ||| | | |||||||| Sbjct 77237 TGCCACTAAACGCTCAGCAAAAGAGGCAGA---GGATTGGATCCATCTTAAAGCCCACTG 77293 Query 126244 CGCCTTTTTCTCGATACACGG--GACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCT 126301 ||||||||||| ||||| || ||| || || |||||||| | ||||||| Sbjct 77294 AGCCTTTTTCTCAATACAAGGAATACGTTC--CATTGCTTCAAATAAACGAGCCTTTTCT 77351 Query 126302 GATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTTCA 126361 | |||| || || |||| || || ||||| ||||| || | |||| Sbjct 77352 TGAGCATCTCGAATATAAGTATCGATAAGAAGAGAATAAGTTTCCGAATGAATATTTTCC 77411 Query 126362 TTATGGCA-CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAAA 126420 | || | ||| | | || ||| | || ||||| ||||| || ||| || |||| Sbjct 77412 AT-TGCTATTTGAAATCCATAAAAACATCGTGCTTCTGGAATCTGGACATCA-CGACAAA 77469 Query 126421 ATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATAT 126479 || || | | ||||| ||||||||||| ||||| ||||| || |||| || Sbjct 77470 ATCTTTCTGCAAGGTTCTCCAAAACAATTCCGTCGGAAGATGCAAAGAAAGCCA----AT 77525 Query 126480 ACTT----TATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCAAGATCCTTC 126535 || | ||||| | | |||| | |||| ||||||| || || | || || Sbjct 77526 ACGTGAGAAATGAAATGGCGCTCATCTGCATTCAATTTCTTCCAATCTTCCAAGTCACTC 77585 Query 126536 GAGAGATCTACCTCCTCCGCAGTCCAA 126562 || | ||||| || || ||||||||| Sbjct 77586 GATAAATCTATTTCTTCAGCAGTCCAA 77612 >seq8 Length=268242 Score = 91.5 bits (100), Expect = 2e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 10873 ATCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGC 10932 |||||| |||||||| || ||||| | ||||| | |||||||| | |||||||||| | Sbjct 226440 ATCAAACCCATCCATTTCCGTCAATAACTGATTCAGAGTTTGTTCTCTTTCATCATTCCC 226499 Query 10933 GGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGAT 10992 | | || |||| ||||| |||| || ||||| |||||||| || |||| || Sbjct 226500 TCCAGCAACTCCTGCACCTCGTTGTCTACCTACCGCGTCTATTTCATCAATAAAAATAAT 226559 Query 10993 ACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACACC 11052 |||||| ||| | ||| |||| | || || || | | ||||| || || Sbjct 226560 ACACGGAGCATTCTTTTTGGCTTGCGCAAATAAGTCACGAACACGACTAGCACCAACTCC 226619 Query 11053 CACAAACATTTCCACAAA 11070 ||||||||||| ||||| Sbjct 226620 AACAAACATTTCTACAAA 226637 >seq36 Length=158315 Score = 82.4 bits (90), Expect = 9e-11 Identities = 139/200 (70%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 10874 TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCG 10933 ||||| || ||||| || || | |||||||| | |||||||| | ||||||||| | Sbjct 64796 TCAAATCCGTCCATTTCTGTTAGTAGTTGATTAAGAGTTTGTTCTCTTTCATCATTTCCT 64855 Query 10934 GGCATACC---ACCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACG 10990 ||| ||| | || | ||| |||||| || ||||||||||| || || || Sbjct 64856 CC---ACCGATACCTGTACCTCTTTGTCGACCGACAGCATCAATTTCATCTATAAATACA 64912 Query 10991 ATACACGGTTGATTTTCACGGGCAACTTCAAAGATATCTCGGACTCTCTTGGCACCGACA 11050 ||||| ||| |||||| || || ||| | ||||| ||||| || || || Sbjct 64913 ATACAAGGTGCATTTTCTTTAGCTTTTTTAAAAAGATCTCTTACTCTAGATGCTCCCACT 64972 Query 11051 CCCACAAACATTTCCACAAA 11070 || ||||||||||| ||||| Sbjct 64973 CCTACAAACATTTCGACAAA 64992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597350366823640