Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq9 98.7 9e-16 >seq9 Length=249065 Score = 98.7 bits (108), Expect = 9e-16 Identities = 155/222 (70%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || ||||||||||| || | |||||||||||||||||||| || || || || ||| Sbjct 144625 AAACGCAACACCAAGTGAAGGGTAGACTCTTTTTGAATATTATAGTCTGACAAAGTACGA 144566 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || | |||||| ||||| | ||||| || || || || || || || || ||| Sbjct 144565 CCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCC 144506 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| || || ||||| | ||| | || || | || ||||| | || Sbjct 144505 TTGTCTTGAATCTTGGACTTGACATTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTA 144446 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || || || || ||||| || ||||| ||||||||| || Sbjct 144445 ATAGTCTTCCCAGTGAGAGTCTTCACAAATATCTGCATGCCT 144404 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || ||||||||||| || | ||||||||||||||||||||||| || || || || Sbjct 144169 AAACGCAACACCAAGTGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGACAAAGTACGG 144110 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || | |||||| ||||| | ||||| || || || || || || ||||| ||| Sbjct 144109 CCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATGCCTTCC 144050 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| || || ||||| | ||| | || || | || ||||| | || Sbjct 144049 TTGTCTTGAATCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTA 143990 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | || || || || ||||| || ||||| || ||||| Sbjct 143989 ATAGTCTTCCCAGTGAGAGTCTTCACAAATATTTGCAT 143952 Score = 95.1 bits (104), Expect = 1e-14 Identities = 154/222 (69%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || ||||||||||| || | |||||||||||||||||||| || || || || ||| Sbjct 144397 AAACGCAACACCAAGTGAAGGGTAGACTCTTTTTGAATATTATAGTCTGACAAAGTACGA 144338 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| || | |||||| ||||| | ||||| || || || || || || || || ||| Sbjct 144337 CCATCTTCCAACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCC 144278 Query 127016 TTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTC 127075 ||||| || || ||||| | ||| | || || | || ||||| | || Sbjct 144277 TTGTCTTGAATCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTA 144218 Query 127076 ACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || || || || ||||| || ||||| || |||||| || Sbjct 144217 ATAGTCTTCCCAGTGAGAGTCTTCACAAATATTTGCATGCCT 144176 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498226351920