Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq26 114 2e-20 >seq26 Length=183063 Score = 114 bits (126), Expect = 2e-20 Identities = 336/508 (66%), Gaps = 21/508 (4%) Strand=Plus/Plus Query 127537 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 127596 ||| || ||||| || || || ||||| |||||| || |||||||| || || | ||| Sbjct 77117 ACCTTCATCACGTGAAATAAGCTCATTAGAGAAGGTCAATCCTGGCATAAGTCCTCTCTT 77176 Query 127597 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 127656 |||||||| || || | |||||| || ||||| || || || ||||| ||| || || Sbjct 77177 TTTCAACCAAAATATGGAACAAAAAGAACCAGAAAAAAATATTCCCTCTACAGCAGCAAA 77236 Query 127657 CGCAAATAGACGCTCGGCAAAGGAGCGGGACT-TTGTATCAAACCACTTCATCGCCCACT 127715 || | || |||||| ||||| ||| || ||| ||| | | | | ||||||| Sbjct 77237 TGCCACTAAACGCTCAGCAAAAGAGGCAGAGGATTGGATCCATC----TTAAAGCCCACT 77292 Query 127716 GTGCCTTTTTCTCGATACATGG--GACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 127773 | ||||||||||| ||||| || ||| || || |||||||| | |||||| Sbjct 77293 GAGCCTTTTTCTCAATACAAGGAATACGTTC--CATTGCTTCAAATAAACGAGCCTTTTC 77350 Query 127774 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCGTGGACCATTTC 127833 | | |||| || || |||| || || ||||| ||||| || | |||| Sbjct 77351 TTGAGCATCTCGAATATAAGTATCGATAAGAAGAGAATAAGTTTCCGAATGAATATTTTC 77410 Query 127834 ATTATGGCA-CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCGGCAA 127892 | || | ||| | | || ||| | || ||||| ||||| || ||| || ||| Sbjct 77411 CAT-TGCTATTTGAAATCCATAAAAACATCGTGCTTCTGGAATCTGGACATCA-CGACAA 77468 Query 127893 AATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 127951 ||| || | | ||||| ||||||||||| ||||| ||||| || |||| | Sbjct 77469 AATCTTTCTGCAAGGTTCTCCAAAACAATTCCGTCGGAAGATGCAAAGAAAGCCA----A 77524 Query 127952 TACTT----TATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCGAGATCCTT 128007 ||| | ||||| | | |||| | |||| ||||||| || || | || | Sbjct 77525 TACGTGAGAAATGAAATGGCGCTCATCTGCATTCAATTTCTTCCAATCTTCCAAGTCACT 77584 Query 128008 TGAGAGATCTACCTCCTCCGCAGTCCAA 128035 || | ||||| || || ||||||||| Sbjct 77585 CGATAAATCTATTTCTTCAGCAGTCCAA 77612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613503879392280