Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq11 448 4e-120 seq12 334 6e-86 seq36 264 9e-65 seq51 127 2e-23 seq6 109 4e-18 seq26 89.7 4e-12 >seq11 Length=227306 Score = 448 bits (496), Expect = 4e-120 Identities = 1058/1575 (67%), Gaps = 47/1575 (3%) Strand=Plus/Minus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 ||||| ||| ||| | ||||||| |||| || || | ||| | ||| |||||| Sbjct 103670 GCTTCCTTAACCATACGTTCAATTTCCTCTTGCGATAAACGTCCTTTTTCATTTGTAATA 103611 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 ||||| || ||| || || || || || | ||| | ||||| | ||||||||| Sbjct 103610 GTAATCTTATTGCTCTTATTGGTACTCTTCTCTACTGCACTGACATTCAAGATACCATTG 103551 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA--GGTGGGATCC 517340 ||||| | |||||| || || ||||||||||| || || | || ||| || || || | Sbjct 103550 GCATCAATATCAAACGTAACCTCAATTTGAGGTACTCCCCG-TG-GCATTGGCGGTATTC 103493 Query 517341 CTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGA 517400 || ||| | |||| ||||| ||||| || || || | ||||| || || Sbjct 103492 CTGTCAAGTCAAATCGTCCCAACAAGTTATTGTCCTTTGTCATAGCACGTTCTCCTTCAT 103433 Query 517401 AAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTT 517460 | | ||| ||||||||| ||| |||||| |||| ||| || ||||||| | |||||| Sbjct 103432 ACACTTGAATAGTAACTGCAGGTTGATTGTCTGCATAGGTAGTAAATATTTGCGATTTTC 103373 Query 517461 TACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTA 517520 | ||||| || || ||||| || || | |||||||| | ||| ||||| || || | Sbjct 103372 TCGTGGGAATAGTAGTATTTCTTTCGATTAACTTGGTCATTACACCGCCTGCAGTCTCAA 103313 Query 517521 AACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT--TTTGAAGTTTTTCATCAGT 517578 ||||||| | ||| |||||||||| ||| | | || |||| | ||| ||| | Sbjct 103312 TACCAAGACTCAAAGGTGTGACATCAAGTAGCAAGAGATCCTTTG----TCTTC-TCACT 103258 Query 517579 TTGACCAAC----AAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAG 517634 | | | | |||| | ||||| || | || |||||||| ||||| |||||||| | Sbjct 103257 TGCATCTCCTGTCAAGATT-GCTGCCTGTACTGCTGCACCATACGCAACTGCTTCATCTG 103199 Query 517635 GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACC 517693 |||||| | | | || | || ||||||||||| | ||| || ||||||| || Sbjct 103198 GATTAATACTCTTGCAAAGCTCCTTGCCATTGAAAAAGTCTTGCAA-AAGTTGTTGAACT 103140 Query 517694 TTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG-----TGATTTAT 517748 || ||||| |||| || ||||| || || |||| ||||| | || || | || Sbjct 103139 TTTGGAATTCGAGTCGAACCTCCTACCAAAACAACATCATGAATTTGACTCTTGGATAAT 103080 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 |||| | ||| | |||| | || ||||| || | | | | ||||| || Sbjct 103079 CCAG-----AGTCCTTAATAACTCTCTCGACGGGATCTATGCACTTGCGGAACAAATCCA 103025 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA 517868 ||| | ||||| || || ||||| |||| | || | | | ||||| |||||| | | Sbjct 103024 TACACAAGTCTTCAAACTTGGCTCTCGTAATACTGGTGTAAAAGTCAATGCCTTCGTAGA 102965 Query 517869 AAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCAC 517928 |||||| |||||||| || ||||| || | | || || | | |||||| | |||| Sbjct 102964 GAGAATCCACTTCAATAGTTGTTTGGGTTGCACTTGAGAGGGTTCTTTTAGCTCTCTCAC 102905 Query 517929 ATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG-AT-TCAAATCTGTTTTATATTT 517986 | ||||| | || |||| | || | |||||| || | | ||| | |||||||| Sbjct 102904 AAGCTGTACGAAGCCTTCTCATAGCGC--GGTGATTGGATGTGATATCCTTGTTATATTT 102847 Query 517987 TCTCTTGAAATCTTCAACACACCATGTTA-CAAGACGATTATCAAAATCTTCACCTCCCA 518045 || ||||| |||| | || || | | || | |||||||||||||| ||||||| Sbjct 102846 TCGTTTGAACTCTTTTGC-CAGATAGTCAACCAGCCTGTTATCAAAATCTTCTCCTCCCA 102788 Query 518046 ATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAG 518105 | | ||||| ||| | || || |||||| || | || || |||| ||| ||||||| Sbjct 102787 AGTGAGTATCTCCAGCAGTTGCCTTTACTTCAAAGACACCTTCATCAATAGATAAAAGAG 102728 Query 518106 TTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACAT-TCATT--TCTTTGTCTT 518162 || ||| || |||||||||| |||||||| || |||| | || ||||| | Sbjct 102727 AAACGTCAAATGTGCCACCACCCAAGTCAAAAATGAGCACATGACGTTCACCTTTGGC-- 102670 Query 518163 GGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAA 518222 | || || | ||||| |||| ||| || ||||| |||||||| || |||| | | Sbjct 102669 -CTCCTTGTCCAATCCATATGCAATAGCTGCTGCAGTGGGTTCATTGATGATTCGAAGTA 102611 Query 518223 CATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAAT 518282 | || | || ||||| || ||||| || || || ||||| || || || ||||| | Sbjct 102610 CGTTCAAGCCTGCAATCGCACCCGCATCCTTGGTTGCCTGTCTCTGGGAGTCATTAAAGT 102551 Query 518283 ATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTT 518342 ||||||| || || | ||| || || |||||| | || | ||| || || |||| Sbjct 102550 ATGCAGGTACTGTGACAACTGCTTCGGTTACTGTTGCCCCCAGATATGCCTCGGCGGTTT 102491 Query 518343 GTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTCAT 518402 ||||| || | || ||||| ||||| | ||||| | | | ||| | || Sbjct 102490 CCTTCATCTTTTGAAGAACCATTGCAGAAATCTCCTCTGGAGCAAAGGTCTTCGTCTCCC 102431 Query 518403 TTTGATATGATACTTCAAAATATGGTTTATTACCAACATT---AATAACTTTAAATGGCC 518459 || || ||||| || | || |||| || | || || ||||| || |||| Sbjct 102430 CTTTGTAATTTACTTGAATGAAGGGCTTATCTCCGTCCTTCGCGATCACTTTGAAAGGCC 102371 Query 518460 AGTATTTCATATCTGATTGAACACTTTGG--TCATTAAAATCTCTACCAATTAATCGTTT 518517 ||| ||||||||||| ||| |||| || ||| ||| | | |||||| | ||||| Sbjct 102370 AGTGTTTCATATCTGCTTG--CACTGAGGAATCAGAAAACTTGCGACCAATAAGGCGTTT 102313 Query 518518 TGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAAT 518577 || ||||| | ||| || ||| |||| || |||||| || || || |||||||| Sbjct 102312 CGCGTCAAAGACAGTGTTCTGTGGGTTAAGAGCGACTTGATTCTTTGCAGCGTCTCCAAT 102253 Query 518578 CAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATT 518637 ||| | || || || || | ||||| || ||||| || | || || || || || Sbjct 102252 CAGTCGCTCCTCGTCCGTGAAAGCGACATAAGAAGGAGTGGTTCTGTTTCCCTGGTCGTT 102193 Query 518638 CGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAA 518697 | ||| ||||| ||| |||| |||||| || |||||| | |||| ||||| || Sbjct 102192 AGGAATGATTTCCACTCGCTCATTCATCCATACTCCCACACAAGAATAAGTCGTTCCCAA 102133 Query 518698 ATCAATACCAATAGC 518712 || ||||| | ||| Sbjct 102132 GTCGATACCTACAGC 102118 Score = 96.9 bits (106), Expect = 3e-14 Identities = 101/133 (76%), Gaps = 0/133 (0%) Strand=Plus/Minus Query 322241 AAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCC 322300 || || ||||||| |||||||||||| |||||||| || ||| ||| || | || || Sbjct 102659 AATCCATATGCAATAGCTGCTGCAGTGGGTTCATTGATGATTCGAAGTACGTTCAAGCCT 102600 Query 322301 GCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACA 322360 ||||| | | | ||| ||||| |||||||| | ||||||||| ||||| ||||| Sbjct 102599 GCAATCGCACCCGCATCCTTGGTTGCCTGTCTCTGGGAGTCATTAAAGTATGCAGGTACT 102540 Query 322361 GTAATAACTGCTT 322373 || | |||||||| Sbjct 102539 GTGACAACTGCTT 102527 >seq12 Length=221157 Score = 334 bits (370), Expect = 6e-86 Identities = 1043/1595 (65%), Gaps = 25/1595 (2%) Strand=Plus/Minus Query 517142 TCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAAT 517201 ||| ||||| | |||||| |||||| | | |||||| ||||| | |||| || | | Sbjct 44825 TCTTCTTCTGCGTATTCTTCAGCTTCCTTGAGCATTCTTTCAATCTCTTCTTGCGACAGT 44766 Query 517202 CTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCA 517261 | ||| | || || || || || | || ||| || | || ||| | ||| Sbjct 44765 CGTCCTTTGTCGTTGGTTATGGTTATTTGCTCCTTTTTATTCGAACCCTTCTCAACTGCA 44706 Query 517262 GTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCT 517321 | ||| |||| || ||||| | || | ||||| || |||||||| ||||| || ||| Sbjct 44705 GAAACACTAAGTATGCCATTAGAGTCTATTTCAAAGGTAACTTCAATCTGAGGTACTCCT 44646 Query 517322 CTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTG 517381 || |||| || || ||||||| ||| | ||| | |||||| || ||||||||| || Sbjct 44645 CTAGGAGCTGGCGGAATCCCTTTCAACTCAAACTTGCCCAGAAGATGATTATCTTTGGTC 44586 Query 517382 AATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTT 517441 | || |||||| || |||| ||| || ||| || ||| ||||| ||| || Sbjct 44585 ATAGCTCTTTCACCTTCAAAAACTTGAATCAGAACAACTTCTTGGTTATCCTGATATGTA 44526 Query 517442 GTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501 || |||| | | ||| || ||| || | |||| | |||| || |||||| Sbjct 44525 GTGAATATTTGTGTTTTCTTTGTAGGGATCACAGAATTTCGTTTGATAAGCTTCGTCATA 44466 Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-- 517559 | ||||| | ||||| | ||| | ||| | |||||| || || | || || |||| Sbjct 44465 ACTCCACCAACAGTTTCGATACCCAAAGATAAAGGAGTAACGTCGAGAAGCACCATATCC 44406 Query 517560 TTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATG 517619 |||| || |||| | || || |||||| | |||| | ||||||||| |||| Sbjct 44405 TTTGT--TTGTTCACCGCCTTCTCCTGAGAGAATACCGCCTTGCACAGCAGCACCGTATG 44348 Query 517620 CAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAA 517678 | |||||||| || ||||||| | | | || | | ||| ||||||||||| | || | Sbjct 44347 CGACAGCTTCGTCTGGATTAATATTCTTATGCAACTCTTTCCCATTGAAAAAGTCTTTTA 44288 Query 517679 AGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACC 517738 || |||| |||||| |||||||||| || |||||||||| |||||||| | || Sbjct 44287 AG-AGTTCCTGTACCTTTGGAATACGAGTAGAGCCTCCAACTAGAACAATTTCGTCAACT 44229 Query 517739 TGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAAC-GGGTTCAAGACCCGCTCT 517797 | ||| || | || || | || || ||| |||||||| || ||||| | | ||| Sbjct 44228 TCTGACTTTTTCATTTCGGCGTCTTGTAGAACCTTTTCAACAGGCTTCAA-AGTCTTTCT 44170 Query 517798 AAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAAT 517857 ||| | || | | ||| || || || || | ||||||||| || | | || | Sbjct 44169 AAATAGATCAGCATTAAGCTCCTCAAAACGTGCGCGAGTAAGAGTTTCAGAAAAGTC--T 44112 Query 517858 TCCT--TCGAACAAAGAATCAA-CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACG 517914 | | ||| | | ||| |||| || | ||| | ||| | | || || || || | Sbjct 44111 TGGTTGTCGTAAAGAGATTCAATCTCTACTCGGA-CTTGTGACTGCGACGACAGAGCTCT 44053 Query 517915 TTTAGCACGTTC-ACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT--TGATTCAA 517971 || || ||| || | ||| | ||| | | ||| || || | |||| Sbjct 44052 CTTGGCTTTTTCAACTTCGCGTCGCAA--CTTGGCCATTGCTTTCCT-ATCCTTGGTCAA 43996 Query 517972 ATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 ||| | | |||||| |||| || || ||| | | ||| | | | |||||| Sbjct 43995 GTCTTTGTCATATTTCTTCTTAAACAGTTTTACAAAGTAATCTACTACTCTTTGATCAAA 43936 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 |||||||| || | | |||| || ||||| |||| || | |||| || Sbjct 43935 GTCTTCACCGCCAAGATGGGTATCACCATTTGTAGCCACAACTTCAAAGACACCATTGTC 43876 Query 518092 AAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCAT 518151 | | ||| | ||| |||||| ||||||||| |||| ||||| | | || || | Sbjct 43875 TATGGTCAATAAAGTGACATCAAAGGTTCCACCTCCCAAGTCAAATACCAAAACGTTTTT 43816 Query 518152 TTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAAT 518211 ||||| | | |||||| | |||||| |||| ||| |||||||| || ||||| || Sbjct 43815 CTCTTTTCCACG---TTTATCCAAACCATATGCAATAGCCGCAGCAGTGGGCTCATTGAT 43759 Query 518212 AATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGA 518271 ||| | |||||||| | || | ||| | || ||||||||||| || || | ||| | Sbjct 43758 AATGCGTAAAACATTCAAGCCTGAAATAGTACCAGCATCTTTAGTTGCCTGACGTTGAGC 43699 Query 518272 ATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGC 518331 ||| ||||||||||| || ||||| | || || | | | ||| || |||| | | Sbjct 43698 ATCATTAAAATATGCCGGGACAGTTACTACTGCGTTTTTGATTTCCTTTCCAAGGAACTC 43639 Query 518332 GCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGGGAATATTG 518391 || | | |||||||||| | | ||| | ||| |||| ||||| | | |||| Sbjct 43638 CTCAGCAATCTTCTTCATTTTACCAAGCACCATAGCTGATATTTCCTCTGGTGCAAATTG 43579 Query 518392 CTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAACTT 518450 || || ||| || | |||| || ||| || || | | || | || || Sbjct 43578 TTTCTTCTCTCCTTTTATCT-CCACTTGAATATAAGGCTTTCCATCCTTGTTCACAATTT 43520 Query 518451 TAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTA 518510 ||||| | | ||| ||||| || ||| || | || | ||| | |||||| | Sbjct 43519 CGTATGGCAATAACTTCCTATCTCTCTGTACAGTTGGTTCGTCAAATCGGCGACCAATAA 43460 Query 518511 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCAT 518570 ||| ||| ||||| |||||||||||||||| || | | |||||||| || || |||| Sbjct 43459 ATCTTTTCACATCATAAATAGTATTGGTTGGGTTCAAAGGAGCTTGATTCTTAGCAGCAT 43400 Query 518571 CTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 518630 | || | || ||| | ||||| ||||| || || || ||| | | |||||| Sbjct 43399 CCCCCACCAATCTTTCCTCCGGAGTAAAAGAAACGTAGGAAGGGGTTATTCTATTACCCA 43340 Query 518631 GATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTG 518690 || || ||||| || || || || ||||||||| || || ||||| | | |||| Sbjct 43339 ACTCGTTTGCAATGATCTCCACCTTGCCATTTTGCATGACGCCAACACAGGAATAGGTTG 43280 Query 518691 TTCCTAAATCAATACCAATAGCAATTTTATCTGAC 518725 | || ||||| ||||| ||| || || | ||||| Sbjct 43279 TACCCAAATCTATACCTATAACAGTTCCAACTGAC 43245 Score = 93.3 bits (102), Expect = 3e-13 Identities = 201/297 (68%), Gaps = 14/297 (5%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTA-ATGTTCTAAATACTCC 322143 ||||| ||||| || || | ||| |||| |||| | || | | ||| ||| || || Sbjct 43940 TCAAAGTCTTCACCGCCAAGATGGGTATCACCATTTGTAGCCACAACTTC-AAAGACACC 43882 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 ||| || ||| ||| | ||||| || || ||| |||| |||||| | || | || Sbjct 43881 ATTGTCTATGGTCAATAAAGTGACATCAAAGGTTCCACCTCCCAAGTCAAATACCAAAAC 43822 Query 322204 GTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGC 322263 ||| ||| | | ||||| ||| ||| ||||| ||||||| ||| || || Sbjct 43821 GTT--------TTTCTCTTTTCCACGTTTA---TCC-AAACCATATGCAATAGCCGCAGC 43774 Query 322264 AGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGT 322323 ||| || ||||| || || | ||||| || || | ||| || ||| ||| ||| Sbjct 43773 AGTGGGCTCATTGATAATGCGTAAAACATTCAAGCCTGAAATAGTACCAGCATCTTTAGT 43714 Query 322324 TGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAAT 322380 ||| || | || || |||||||||||||| || ||||| | ||||| || || || Sbjct 43713 TGCCTGACGTTGAGCATCATTAAAATATGCCGGGACAGTTACTACTGCGTTTTTGAT 43657 >seq36 Length=158315 Score = 264 bits (292), Expect = 9e-65 Identities = 754/1143 (66%), Gaps = 71/1143 (6%) Strand=Plus/Minus Query 517217 GTAATAGTAATA--TTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAA 517274 |||||||||||| || || ||||| |||| |||||| || || || | || Sbjct 86548 GTAATAGTAATAGATTGTTCC--TTGTTAGTTGCTTTATCTTTAGCTGTGACGGATAAAA 86491 Query 517275 TACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTG 517334 | ||||| ||||| | ||||||||| |||||||||||||| || ||||| | ||||||| Sbjct 86490 TTCCATTAGCATCAATATCAAATGTAACTTCAATTTGAGGCACACCTCTTGGTGCAGGTG 86431 Query 517335 GGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCAC 517394 ||||| || || ||| ||||| | | | ||||||||||| | | || || ||||| Sbjct 86430 CTATCCCATCTAAGCGAAAAGTTCCTAAACTTTTATTATCTTTTGCTAGTTCTCTTTCAC 86371 Query 517395 CCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGG 517454 | | |||| || || ||| || |||||||||| || | ||| | | | Sbjct 86370 CTTGTAAAACATGAATTTCAACATTAGGTTGATTATCTATTGCTGTAGAAAAAATTTCTG 86311 Query 517455 ATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTG 517514 ||||||| ||||||||||| || | ||| || || ||||||| ||||||| | Sbjct 86310 ATTTTTTCGTTGGAATTGTTGTATTACGTGGAATTATTTTAGTCATAACACCACCTAAAG 86251 Query 517515 TTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCAT 517574 |||| | || | ||| |||||||| ||||| | || | |||| || |||| Sbjct 86250 TTTCAACTCCTAAAGAGAGAGGAGTAACATCTAATA--ATAATA-----AATCTTTT--- 86201 Query 517575 CAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAG 517634 || |||| | | || | |||| || | ||| ||||| ||| ||| ||||||| | Sbjct 86200 --ACTTCACCAGCTAAAACACCTGCCTGCACAGCTGCACCTATTGCCACAACTTCATCTG 86143 Query 517635 GATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT--TAC 517692 |||||||| | | |||| || ||||| | | | | |||||| || |||| | || Sbjct 86142 GATTAACACTCTGATTTGGTACCTTACC--TAAGATATTTTGAACCAA-TTGTTTAATAG 86086 Query 517693 CTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAG 517752 || ||||| | | ||| ||||| || | |||| ||||| | | | | ||| Sbjct 86085 CT--GGAATTCTTGTTGAACCTCCGACAAGAACAACTTCATTTATTTTAGTTGCATCAGT 86028 Query 517753 TTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGAC-CCGCTCTAAACAAGTCTGAAC 517811 ||||| ||| |||| | | || || ||| | ||| || | | | || || |||| Sbjct 86027 TTTTGCATCTTTTAAAGCAGTCTCTACTGGTATACGACAACGAT-TGATTAAATCAGAAC 85969 Query 517812 AAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACA--- 517868 | | |||||| |||||||| || ||||| || || | | ||| || || || Sbjct 85968 ACAATTCTTCAAATTTAGCCCTGGTAAGTGT----TTTTTCTAAATGTTTTGGACCAGTA 85913 Query 517869 -----------AAGAA----TCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCAC 517913 || || | |||| ||| |||||| | |||||| || Sbjct 85912 TCTGTAGCCGTAATAAAAGGTAAACT--AATTTCTGTTTGACTTACGTTTGATAGTTCAA 85855 Query 517914 GTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAAT 517973 ||| || ||| |||| ||| |||| ||||||||| | || | | |||| Sbjct 85854 CTTTTGCTTTTTCTGCTGCTTCAGTTAATCTTTGTAAGGCTTGTTTATCTTTACTTAAAT 85795 Query 517974 CTGTT--TTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAA 518031 || || || || || | || || || || |||| ||||| |||||||| Sbjct 85794 CTATTCCTTCTAATT--TTTTAAACTCACTAATTAACCAATCTACAATCTTTTTATCAAA 85737 Query 518032 ATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTC 518091 ||| |||||||| | | ||||| ||| | |||| | |||| || | ||| ||| | Sbjct 85736 ATCATCACCTCCAAGATGAGTATCTCCAGCTGTAGATAAAACTTCAAAGACTCCGTCTCC 85677 Query 518092 AAGAGAC-AAAAGAGTT---ACATCATGGGTTCCACCACCCATATCAAA-AATAA-GTAC 518145 ||| ||| || |||||| |||||||||||| | |||||| | ||| | Sbjct 85676 ----GACTTCAAGTATTGAAACATCAAAGGTTCCACCACCTAAATCAAAGACTAATATTG 85621 Query 518146 ATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTC 518205 |||||| |||| ||||| || | |||||| || || | ||||||||| ||||| Sbjct 85620 TTTCATTACTTT-TCTTG-------TCTAAACCATAGGCTAATGAAGCAGCAGTAGGTTC 85569 Query 518206 ATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCT 518265 ||||||||| | | ||| | | || ||||| | |||||||||||||| ||||| | Sbjct 85568 ATTAATAATACGTAGAACTTCTAATCCTGCAATCTTACCTGCATCTTTAGTTGCTTGACG 85509 Query 518266 TTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAAT 518325 ||||||||| |||||||| || ||||| || || || || | ||| |||| || ||| | Sbjct 85508 TTGTGAATCATTAAAATAAGCTGGAACTGTGATCACTGCTTGAGTAACTTTTTGACCCAA 85449 Query 518326 ATA 518328 ||| Sbjct 85448 ATA 85446 Score = 102 bits (112), Expect = 6e-16 Identities = 216/323 (67%), Gaps = 21/323 (7%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 |||||||| || ||||| | ||| |||| ||| || | ||| | ||| ||||| Sbjct 85741 TCAAAATCATCACCTCCAAGATGAGTATCTCCAGCTGTAGATAAAACTTCAAAGACTCCG 85682 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTACG 322204 | | || | | || |||||||| || || ||| | ||||| ||| | || | || Sbjct 85681 TCTCCGACTTCAAGTATTGAAACATCAAAGGTTCCACCACCTAAATCAAAGACTAATA-- 85624 Query 322205 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 322264 || ||| ||| | ||| | | ||||||| || || | | || ||| Sbjct 85623 ----------TTGTTTCATTACTTTTCT---TGTCTAAACCATAGGCTAATGAAGCAGCA 85577 Query 322265 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 322324 || ||||||||||| || ||||| ||||| || ||||| ||| | | ||| |||| Sbjct 85576 GTAGGTTCATTAATAATACGTAGAACTTCTAATCCTGCAATCTTACCTGCATCTTTAGTT 85517 Query 322325 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGGT 322384 ||||| | |||| ||||||||||| ||||| || || || ||||||| | ||| | Sbjct 85516 GCTTGACGTTGTGAATCATTAAAATAAGCTGGAACTGTGATCACTGCTTGAGTAA---CT 85460 Query 322385 TTTTG---TAAATATTGGCTCGC 322404 ||||| |||||||| || || Sbjct 85459 TTTTGACCCAAATATTGACTAGC 85437 >seq51 Length=120017 Score = 127 bits (140), Expect = 2e-23 Identities = 277/407 (68%), Gaps = 16/407 (4%) Strand=Plus/Minus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 |||| |||| |||||||||||| ||||| | |||||| || || ||||||||||| | Sbjct 87987 GCAGATACATGAAGAATACCATTCGCATCGATATCAAAAGTAACCTCAATTTGAGGAATT 87928 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 ||||| | ||||| || || || |||| | |||| ||||| ||||||||| Sbjct 87927 CCTCTAGGCGCAGGGGGTATACCAACCAAGTCAAATTGACCCAGTAACTTATTATCTGCT 87868 Query 517379 GTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAA 517438 | | || ||||||||| | || || || ||| |||| ||||||||||||| | Sbjct 87867 GCCATTTCTCGTTCACCTTGGAGAACTTTGATTCCAACTTGCGTTTGATTATCTGCAGCT 87808 Query 517439 GTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GT 517497 || | || ||| || ||||| ||||| || || ||||| ||| | || | || Sbjct 87807 GTGGAGAAAACTTGTGACTTTTTGGTGGGAATAGTGGTATTTCTGGGAATCA-ATCGAGT 87749 Query 517498 CATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAAT 517557 | || || || ||||| | || |||||||||||||| ||||| | || | ||| Sbjct 87748 GAAAACTCCTCCAAGAGTTTCAATGCCTAGAGAAAGAGGAGTAACATCCAATA--ATAAT 87691 Query 517558 ATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGC-ACCAT 517616 || | |||| || | ||| | | | || |||||||||| || |||| Sbjct 87690 AT------ATCCTTCA-CA---TCTCCACGTAATACACCTCCTTGAATAGCTGCTCCCAT 87641 Query 517617 ATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCA 517663 | ||||| ||||||| ||||| ||| || || ||| ||||||| Sbjct 87640 A-GCAACTACTTCATCTGGATTGACACCTTTGCTTGGTTCTTTACCA 87595 >seq6 Length=291449 Score = 109 bits (120), Expect = 4e-18 Identities = 128/172 (74%), Gaps = 1/172 (1%) Strand=Plus/Plus Query 870799 TATTG-TCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGAT 870857 ||||| | || | |||| ||| |||||||| ||||||||||| | ||||| || |||| Sbjct 139629 TATTGGTTGACTTTTCTAGTCCCAATATTGCCAAAGAAATGCACGTGGGACACTTGAGAT 139688 Query 870858 CAACTATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATC 870917 | || ||||| || || | | | ||| | ||||| ||| | | || ||| | || | Sbjct 139689 CCACCATTATAGGCGACTGTCTATGTCGAGTATTGGAATTCTTAGGTCACCAAGTGTTAA 139748 Query 870918 GTATTAATCATGTGGGTGATTGGGGAACTCAATTCGGTATGTTAATTGCTTA 870969 | || ||||||||||| || |||||||| ||||| || ||||| ||||| || Sbjct 139749 GAATCAATCATGTGGGGGACTGGGGAACACAATTTGGAATGTTGATTGCATA 139800 >seq26 Length=183063 Score = 89.7 bits (98), Expect = 4e-12 Identities = 228/341 (67%), Gaps = 22/341 (6%) Strand=Plus/Plus Query 156013 AGTACAATATGCTCTAGATATTTTTTCACTGACTTCTTGTTCAGTATCATCCATAAAAAT 156072 || |||| | |||| ||| ||| | | || |||||||| | || |||||||| || Sbjct 59005 AGGACAAAACGCTCGTTTTATCTTTCTATTCACATCTTGTTCCGAGTCTTCCATAAATAT 59064 Query 156073 TGCACCTTGAGGATCAGATTTACTCAtttttttttttGGACCAGATAGACTCAT--TAAC 156130 |||| | ||||| ||||||||||| |||| || | | | | | | | |||| Sbjct 59065 TGCAGAGTCGGGATCTGATTTACTCATCTTTTCTTGTC--CTTGTTTCAAACCTGGTAAC 59122 Query 156131 ATGTGATGTGATAGAGAAATTGG---GA----TTTTTAATCCACGGT--CATTTGCATAT 156181 || || || |||| | ||| || || ||| | | | | | ||| |||| Sbjct 59123 ATATGGTGCGATAAAATAATAGGCTTGAACTTTTTCTTAGGCTTGATATCATCACAATAT 59182 Query 156182 TCAATAGCCAACATATTGACTTTACGTTGATCAATTCCTAGTTGACAAATGTCAATTCCT 156241 || | || | |||||| ||||| || || || ||||| |||||||| || ||| | | Sbjct 59183 TCTCTTGCAAGCATATTAACTTTCCGCTGGTCCATTCCAAGTTGACATATATCAGCT--T 59240 Query 156242 TCAGGAACTAATTCAAATACGTCTGCAGCTTGCATACAAGGATAGAAAATTTGTGAGGCT 156301 | || || || ||| || ||| |||||||||||||||||| ||||||| ||| Sbjct 59241 TGAGAAAGAAA-----ATA--TCCGCACATTGCATACAAGGATAGAATATTTGTGCAGCT 59293 Query 156302 TTTAAACAATCACTTTCATTACGACCCATGATTTGACAACA 156342 ||| ||| | ||||| | |||||||||||| |||| Sbjct 59294 GATAACTCATCGGTATCATTTCTACCCATGATTTGTGAACA 59334 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780800913113698