Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq11 504 9e-138 seq12 188 9e-43 seq36 176 6e-39 seq19 167 3e-36 seq6 150 2e-31 seq26 104 3e-17 seq1 96.9 4e-15 seq62 82.4 1e-10 >seq11 Length=227306 Score = 504 bits (558), Expect = 9e-138 Identities = 1106/1640 (67%), Gaps = 39/1640 (2%) Strand=Plus/Minus Query 6529 TTCGAGACCATTCTTCGCCTCGACCTT---TTTCGCGTACTTTTCATCTTCATCTTTATA 6585 ||| |||| ||||||||| |||| |||| | ||| |||||||| | || || Sbjct 103734 TTCAAGACTATTCTTCGCTTCGATGCGAACTTTC---TGCTTCTCATCTTCCGCCTTGTA 103678 Query 6586 CTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCATT 6645 || |||||| || | ||||| |||||| || |||| |||||| | || || ||||| Sbjct 103677 CTGTTCCGCTTCCTTAACCATACGTTCAATTTCCTCTTGCGATAAACGTCCTTTTTCATT 103618 Query 6646 CGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAAT 6705 ||||| |||||||| | | ||| | ||| ||| | ||||| |||||||| || Sbjct 103617 TGTAATAGTAATCTTATTGCTCTTATTGGTACTCTTCTCTACTGCACTGACATTCAAGAT 103558 Query 6706 ACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGC---GGC 6762 |||||| ||||||| ||| ||| | || | |||||| ||| || || || || ||| Sbjct 103557 ACCATTGGCATCAATATCAAACGTAACCTCAATTTGAGGT--ACTCCCCGTGGCATTGGC 103500 Query 6763 TGGAATACCCGTTAAATCAAAT-GTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTT 6821 || || || || || |||||| || |||| || | || ||| | | | | ||||| Sbjct 103499 -GGTATTCCTGTCAAGTCAAATCGTCCCAAC-AAGTTATTGTCCTTTGTCATAGCACGTT 103442 Query 6822 CACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTT 6881 | |||||||| |||| ||| || || ||||||||||| ||| || | || |||| Sbjct 103441 CTCCTTCATACACTTGAATAGTAACTGCAGGTTGATTGTCTGCATAGGTAGTAAATATTT 103382 Query 6882 GTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCA 6941 | ||| | | ||||| || |||||||| || | | |||||| | ||| || Sbjct 103381 GCGATTTTCTCGTGGGAATAGTAGTATTTCTTTCGATTAACTTGGTCATTACACCGCCTG 103322 Query 6942 TAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATT 7001 ||| || | |||||| || |||||| || || | || || || || | | Sbjct 103321 CAGTCTCAATACCAAGACTCAAAGGTGTGACATCAAGTAGCAAGAGATCCTTTGTCTTCT 103262 Query 7002 CGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCAT 7061 | | | || || || ||||| || || || || | || || || || || || |||| Sbjct 103261 CACTTGCATCTCCTGTCAAGATTGCTGCCTGTACTGCTGCACCATACGCAACTGCTTCAT 103202 Query 7062 CGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAA 7121 | || ||||| | || || || || || || ||| | || || | |||||||| Sbjct 103201 CTGGATTAATACTCTTGCAAAGCTCCTTGCCATTGAAAAAGTCTTGCAAAAGTTGTTGAA 103142 Query 7122 TTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGA 7181 ||| || ||||| ||||| || || |||||||| | |||| | || || | | || Sbjct 103141 CTTTTGGAATTCGAGTCGAACCTCCTACCAAAACAACATCATGAATTT--GACTCTTGGA 103084 Query 7182 TCTTT--GAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCAT 7239 | | ||||| || | | ||||| || || || || || |||||||| ||||| Sbjct 103083 TAATCCAGAGTCCTTAATAACTCTCTCGACGGGATCTATGCACTTGCGGAACAAATCCAT 103024 Query 7240 ACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAA 7299 ||||| || ||||| || | ||||| || || || |||| ||| ||||| | Sbjct 103023 ACACAAGTCTTCAAACTTGGCTCTCGTAATACTGGTGTAAAAGTCAATGCCTTCGTAGAG 102964 Query 7300 CGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACA 7359 ||||| | |||||| |||||||| | | || | |||| || || | |||||| Sbjct 102963 AGAATCCACTTCAATAGTTGTTTGGGTTGCACTTGAGAGGGTTCTTTTAGCTCTCTCACA 102904 Query 7360 CGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACG 7419 || || || | | | | || || | || | ||||| || |||| ||| || Sbjct 102903 AGCTGTACGAAGCCTTCTCATAGCGCGGTGATTGGATGTGATATCCTTGTTATATTTTCG 102844 Query 7420 TTTAAACTCTT----CAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCA 7475 ||| ||||||| |||| | ||| || || || ||| |||||||| || |||| Sbjct 102843 TTTGAACTCTTTTGCCAGATA---GTC-AACCAGCCTGTTATCAAAATCTTCTCCTCCCA 102788 Query 7476 AGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACG 7535 |||| ||||| || || || || || |||||||||| |||| | ||||| ||| | | Sbjct 102787 AGTGAGTATCTCCAGCAGTTGCCTTTACTTCAAAGACACCTTCATCAATAGATAAAAGAG 102728 Query 7536 AAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGT-TCGTATCGTCGTCTTTG 7594 |||| ||||| || |||||||||| |||||||||||| || | ||| || ||||| Sbjct 102727 AAACGTCAAATGTGCCACCACCCAAGTCAAAAATGAGCACATGACGT----TCACCTTTG 102672 Query 7595 ---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGA 7651 | ||| || | || || || ||||| || || || |||||||| || || ||||| Sbjct 102671 GCCTCCTTGTCCAATCCATATGCAATAGCTGCTGCAGTGGGTTCATTGATGATTCGAAGT 102612 Query 7652 CAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAG 7711 ||||| ||| ||||| | ||||||| || || || |||| || || || |||||| Sbjct 102611 ACGTTCAAGCCTGCAATCGCACCCGCATCCTTGGTTGCCTGTCTCTGGGAGTCATTAAAG 102552 Query 7712 TAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATA 7771 || || || || || || || || || || ||| | || ||||| | || ||| | Sbjct 102551 TATGCAGGTACTGTGACAACTGCTTCGGTTACTGTTGCCCCCAGATATGCCTCGGCGGTT 102492 Query 7772 TCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCA 7831 || ||||| || ||||||||| | |||||||| || | ||||| ||||| || Sbjct 102491 TCCTTCATCTTTTGAAGAACCATTGCAGAAATCTCCTCTGGAGCAAAGGTCTTCGTCTCC 102432 Query 7832 CCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGAC 7891 || || ||| |||| ||| | ||| ||||| | | | ||| || || | | | Sbjct 102431 CCTTTGTAATTTACTTGAATGAAGGGCTTATCTCCGTCCTTCGCGATCACTTTGAAAGGC 102372 Query 7892 CAATCTTTCATATCGTCTTGGACCTGTTG-GTCCGAAAACTTTCTTCCGATAAGACGCTT 7950 || | ||||||||| |||| | ||| | || |||||||| | || ||||| || || Sbjct 102371 CAGTGTTTCATATCTGCTTGCA-CTGAGGAATCAGAAAACTTGCGACCAATAAGGCGTTT 102313 Query 7951 TGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGAT 8010 || ||||| || ||||| | ||||| | || ||| ||||| || ||||| || || Sbjct 102312 CGCGTCAAAGACAGTGTTCTGTGGGTTAAGAGCGACTTGATTCTTTGCAGCGTCTCCAAT 102253 Query 8011 AAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTC 8070 || || || | ||||| || ||||| || || || || |||| || || ||||| Sbjct 102252 CAGTCGCTC---CTCGTCCGTGAAAGCGACATAAGAAGGAGTGGTTCTGTTTCCCTGGTC 102196 Query 8071 GTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCC 8130 ||| | ||| ||||| || || || || ||| || || || || ||||| || ||||| Sbjct 102195 GTTAGGAATGATTTCCACTCGCTCATTCATCCATACTCCCACACAAGAATAAGTCGTTCC 102136 Query 8131 TAAATCAATACCGATTGCTT 8150 || || ||||| | |||| Sbjct 102135 CAAGTCGATACCTACAGCTT 102116 >seq12 Length=221157 Score = 188 bits (208), Expect = 9e-43 Identities = 1041/1647 (63%), Gaps = 59/1647 (4%) Strand=Plus/Minus Query 6524 TAGTTTTCGAGACCATTCTTCGCCTCGACCTTTTTCGCGT-ACTTTTCATCTTCATCTTT 6582 |||||||| | || || | || ||||||||||| || | || | ||||| ||| Sbjct 44873 TAGTTTTCTAATCCGTTTCTAGCTTCGACCTTTTTAGCCTGACGCCTG-TCTTCTTCTGC 44815 Query 6583 ATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATC 6642 || | ||| || || | || ||| ||||||| ||||||| ||| | || || || || Sbjct 44814 GTATTCTTCAGCTTCCTTGAGCATTCTTTCAATCTCTTCTTGCGACAGTCGTCCTTTGTC 44755 Query 6643 ATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAA 6702 || || || || || | || |||| ||| |||| || | ||| ||| | | Sbjct 44754 GTTGGTTATGGTTATTTGCTCCTTTTTATTCGAACCCTTCTCAACTGCAGAAACACTAAG 44695 Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762 || ||||| | || | || || | || | ||| || ||| || || || || | Sbjct 44694 TATGCCATTAGAGTCTATTTCAAAGGTAACTTCAATCTGAGGTACTCCTCTAGGAGCTGG 44635 Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822 ||||| || | || ||||| | || || | | ||||| | | | | | ||| Sbjct 44634 CGGAATCCCTTTCAACTCAAACTTGCCCAGAAGATGATTATCTTTGGTCATAGCTCTTTC 44575 Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882 ||||||| | |||| ||| || | ||| ||||| || || | ||| ||||| Sbjct 44574 ACCTTCAAAAACTTGAATCAGAACAACTTCTTGGTTATCCTGATATGTAGTGAATATTTG 44515 Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCAT 6942 | |||||| | || ||| | ||||| |||| | ||||||| ||||| | Sbjct 44514 TGTTTTCTTTGTAGGGATCACAGAATTTCGTTTGATAAGCTTCGTCATAACTCCACCAAC 44455 Query 6943 AGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTC--TTGAACAGAT 7000 |||||||| || | ||| | ||| || ||||| | || | || || ||| | Sbjct 44454 AGTTTCGATACCCAAAGATAAAGGAGTAACGTCGAGAAGCACCATATCCTTTG------T 44401 Query 7001 TCGTTC----CCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGC 7056 | |||| ||||| || | | || || |||| || | || ||||||||||| || Sbjct 44400 TTGTTCACCGCCTTCTCCTGAGAGAATACCGCCTTGCACAGCAGCACCGTATGCGACAGC 44341 Query 7057 CTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATTTG 7116 || || || ||||| | |||| || ||||| || || ||| | || ||| | || Sbjct 44340 TTCGTCTGGATTAATATTCTTATGCAACTCTTTCCCATTGAAAAAGTCTTTTAAGAGTTC 44281 Query 7117 TTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTT 7176 || | || || || || || || || || || | ||| ||||| | |||| || || Sbjct 44280 CTGTACCTTTGGAATACGAGTAGAGCCTCCAACTAGAACAATTTCGTCAACTTCTGACTT 44221 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 | || | | |||| | || ||||| ||||| | || | || | || | || Sbjct 44220 TTTCATTTCGGCGTCTTGTAGAACCTTTTCAACAGGCTTCAAAGTCTTTCTAAATAGATC 44161 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 | || |||||||||||||| || |||| | | | | || || | |||||| Sbjct 44160 AGCATTAAGCTCCTCAAAACGTGCGCGAGTAAGAGTTTCAGAAAAGTCTTGGTTGTCGTA 44101 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTC 7356 | || ||||| || | ||||| | ||| || | | || ||| || || Sbjct 44100 AAGAGATTCAATCTCTACTCGGACTTGTGACTGCGACGACAGAGCTCTCTTGGCTTTTTC 44041 Query 7357 ACACGCCGTTCGTAAACGACGAA---GGGCACGCGGGTTACC-------GGAAATATCTT 7406 | || |||| || || | ||| | | || || || | |||| Sbjct 44040 A-AC----TTCG----CGTCGCAACTTGGC-CATTGCTTTCCTATCCTTGGTCAAGTCTT 43991 Query 7407 TCTTATGTTTACGTTTAAAC---TCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 | | || ||| |||||| | | || || | | | | | ||| ||| || | Sbjct 43990 TGTCATATTTCTTCTTAAACAGTTTTACAAAGTAATCT---ACTACTCTTTGATCAAAGT 43934 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 ||||||| || | || ||||| || || || |||||||||| ||| || | Sbjct 43933 CTTCACCGCCAAGATGGGTATCACCATTTGTAGCCACAACTTCAAAGACACCATTGTCTA 43874 Query 7524 TGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTAT 7583 || | || || | |||||||| || ||||| |||| |||||| | | ||||| | | Sbjct 43873 TGGTCAATAAAGTGACATCAAAGGTTCCACCTCCCAAGTCAAATACCAAAACGTTTTTCT 43814 Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 | | || || ||||| | ||| || || |||||||| || || || ||||| |||| Sbjct 43813 C-TTTTCCACGT--TTATCCAAACCATATGCAATAGCCGCAGCAGTGGGCTCATTGATAA 43757 Query 7644 TACG-AAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAA 7702 | || || ||| |||| ||| | |||||| | |||||||| || || || ||||| | | Sbjct 43756 TGCGTAAAACA-TTCAAGCCTGAAATAGTACCAGCATCTTTAGTTGCCTGACGTTGAGCA 43698 Query 7703 TCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGAT 7762 || ||||| || |||||||| ||||| || |||| ||| || ||| || || || Sbjct 43697 TCATTAAAATATGCCGGGACAGTTACTACTGCGTTTTTGATTTCCTTTCCAAGGAACTCC 43638 Query 7763 TCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGT 7822 || || || | |||||||| ||| ||||| | ||| || || || | ||||| ||| Sbjct 43637 TCAGCAATCTTCTTCATTTTACCAAGCACCATAGCTGATATTTCCTCTGGTGCAAATTGT 43578 Query 7823 TTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACC 7882 ||| | || || || | || |||| ||| || | | || || | | | || Sbjct 43577 TTCTTCTCTCCTTTTATCTCCACTTGAAT-ATAAGGCTTTC--CATCCTTGTTCACAATT 43521 Query 7883 TTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCG-AAAACTTTCTTCCGAT 7941 | || | | | ||| |||| ||| | | |||||| || ||| | || || Sbjct 43520 TCGTATGGCAATAACTTCCTATC-TCTCTGTACAGTTGGTTCGTCAAATCGGCGACCAAT 43462 Query 7942 AAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGC 8001 || | || ||||| ||| || || | ||||||| | | ||| ||||| || || Sbjct 43461 AAATCTTTTCACATCATAAATAGTATTGGTTGGGTTCAAAGGAGCTTGATTCTTAGCAGC 43402 Query 8002 GTCCCCGATAAGACGTTCATTATTTTCC---GTAAACGCGACGTACGATGGGGTCGTTCG 8058 ||||| | | | ||| ||| ||||| | ||||| || ||||| ||| Sbjct 43401 ATCCCCCACCAATCTTTC------CTCCGGAGTAAAAGAAACGTAGGAAGGGGTTATTCT 43348 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGA 8118 ||| || ||||| ||||| || || || | | |||||| |||||| || || || Sbjct 43347 ATTACCCAACTCGTTTGCAATGATCTCCACCTTGCCATTTTGCATGACGCCAACACAGGA 43288 Query 8119 ATACGTTGTTCCTAAATCAATACCGAT 8145 ||| ||||| || ||||| ||||| || Sbjct 43287 ATAGGTTGTACCCAAATCTATACCTAT 43261 >seq36 Length=158315 Score = 176 bits (194), Expect = 6e-39 Identities = 356/522 (68%), Gaps = 6/522 (1%) Strand=Plus/Plus Query 11253 ATCAGGTAAAGAAACTTGTATTTTACGATCAAATCTACCGGGGCGTAATAACGCATCGTC 11312 |||||||| | ||| |||| |||||| || | || || | |||||| ||| | || Sbjct 64684 ATCAGGTAGATCTACTGTAATTTGACGATCGAAACGTCCAGGCCTTAATAAAGCAACATC 64743 Query 11313 GAGTATATCGATACGGTTTGTTGCACCTATAACAACAATTTCAGTTTCATTCTCGAAACC 11372 | || ||| || | || ||||| ||| ||||| || | || | ||| || || Sbjct 64744 TAATACATCAATTCTATTAGTTGCGGCTACAACAATTATACCTGTATTCCCCTCAAATCC 64803 Query 11373 ATCCATTTCTGTTAATAATTGGTTAATTGTTTGTTCACGCTCATCGTTTGCCGCAAACCC 11432 ||||||||||||| || ||| |||| |||||||| | ||||| ||| || | ||| Sbjct 64804 GTCCATTTCTGTTAGTAGTTGATTAAGAGTTTGTTCTCTTTCATCATTT-CCTC-CACCG 64861 Query 11433 ATTC--ATACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGT 11490 || | ||| ||||| ||| | |||||||||||||||||||| | |||||| ||| Sbjct 64862 ATACCTGTACCTCTTTGTCGACCGACAGCATCAATTTCATCTATAAATACAATACAAGGT 64921 Query 11491 TGATTTTCACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAAC 11550 |||||| || || ||| | ||| | ||||| ||| || || ||||||||| Sbjct 64922 GCATTTTCTTTAGCTTTTTTAAAAAGATCTCTTACTCTAGATGCTCCCACTCCTACAAAC 64981 Query 11551 ATTTCAACGAACGATGACCCCG-AACACTGAATAAAAGGAACGGAAGATTCACCCGCTAT 11609 ||||| || || || || | || ||| || ||| || || | |||||| || || Sbjct 64982 ATTTCGACAAATTCAGATCCAGAAATACT-AAAAAATGGTACACCTGCTTCACCGGCAAT 65040 Query 11610 AGCACGTGCTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGG 11669 ||| |||||||| ||||||||||| |||||| ||| | |||| | || |||| Sbjct 65041 AGCTTTAGCTAAAAGAGTTTTACCTGTCCCTGGTGCACCAACAAGTAATACTCCTTTTGG 65100 Query 11670 TATTTTAGCACCGGTACCAAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAATTTCTTC 11729 ||| ||||||| || || | |||||||| || | |||| |||||||| | Sbjct 65101 AATTCTAGCACCAATAGCAGTAAATCTTTCTGGCTTTTTTAAAAAAGTTACAATTTCCTG 65160 Query 11730 GAGCTCATCTTTCGCGCTATCTATACCCTGAACATCATCAAA 11771 | ||| || || || || || || || ||||||||| Sbjct 65161 AAACTCTTCCTTAGCTTCTTCAATTCCTGCAATATCATCAAA 65202 Score = 102 bits (112), Expect = 1e-16 Identities = 324/499 (65%), Gaps = 25/499 (5%) Strand=Plus/Minus Query 6677 GCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTA 6736 || ||||||| ||| | || ||||| ||||| ||||||| ||| || | || | | Sbjct 86518 GCTTTATCTTTAGCTGTGACGGATAAAATTCCATTAGCATCAATATCAAATGTAACTTCA 86459 Query 6737 ATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAA 6796 ||||| || ||| || ||||| | || || || ||| ||| || || |||| Sbjct 86458 ATTTGAGGCACACCTCTTGGTGCAGGTGCTATCCCATCTAAGCGAAAAGTTCC---TAAA 86402 Query 6797 CTGTTAT---CCGTCGCC--TTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAG 6851 || |||| | | || |||| | |||||||| | || | |||| || || Sbjct 86401 CTTTTATTATCTTTTGCTAGTTCT--CTTTCACCTTGTAAAACATGAATTTCAACATTAG 86344 Query 6852 GTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTC 6911 ||||||||||| ||| || || || |||| | ||| || | |||||| || ||||| | Sbjct 86343 GTTGATTATCTATTGCTGTAGAAAAAATTTCTGATTTTTTCGTTGGAATTGTTGTATTAC 86284 Query 6912 TCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCA 6971 ||||| | ||||||| |||||| | |||||| | ||| | ||| ||||| || | Sbjct 86283 GTGGAATTATTTTAGTCATAACACCACCTAAAGTTTCAACTCCTAAAGAGAGAGGAGTAA 86224 Query 6972 CGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTT 7031 | || || | ||| | | || || ||||||| | ||| | | || | Sbjct 86223 CATCTAATAATAATA------------AATCTTTTACTTCACCAGCTAAAACACCTGCCT 86176 Query 7032 GGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTAC 7091 | || | || || ||| || | ||||| || |||| | | ||| || | |||| Sbjct 86175 GCACAGCTGCACCTATTGCCACAACTTCATCTGGATTAACACTCTGATTTGGTACCTTAC 86116 Query 7092 CGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCA 7151 | ||| ||| | || | || ||||| ||| || |||| ||| || || ||||| | Sbjct 86115 C--TAAGATATTTTGA-ACCAATTGTTTAATAGCTGGAATTCTTGTTGAACCTCCGACAA 86059 Query 7152 AAACGATTTCATTCACTTT 7170 ||| | |||||| | ||| Sbjct 86058 GAACAACTTCATTTATTTT 86040 Score = 100 bits (110), Expect = 4e-16 Identities = 208/304 (68%), Gaps = 8/304 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| ||||| ||||| || | || ||||| || || || | | |||||||||| || Sbjct 85742 ATCAAAATCATCACCTCCAAGATGAGTATCTCCAGCTGTAGATAAAACTTCAAAGACTCC 85683 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 || | | | | | ||||||||||| || |||||||| | ||||| | | || Sbjct 85682 GTCTCCGACTTCAAGTATTGAAACATCAAAGGTTCCACCACCTAAATCAAAGACTAATA- 85624 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || || | |||| |||| || | ||| || || | | || || || ||||| Sbjct 85623 --TTGTTTCATTA-CTTT--TCTTGTCTAAACCATAGGCTAATGAAGCAGCAGTAGGTTC 85569 Query 7636 ATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||||||||||| ||| | ||| | || ||||| | | |||||||| || ||||| | Sbjct 85568 ATTAATAATACGTAGA-ACTTCTAATCCTGCAATCTTACCTGCATCTTTAGTTGCTTGAC 85510 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 |||| ||||| ||||| || || || || || | || || | || ||||| | ||| | Sbjct 85509 GTTGTGAATCATTAAAATAAGCTGGAACTGTGATCACTGCTTGAGTAACTTTTTGACCCA 85450 Query 7755 GATA 7758 ||| Sbjct 85449 AATA 85446 >seq19 Length=190679 Score = 167 bits (184), Expect = 3e-36 Identities = 317/464 (68%), Gaps = 7/464 (2%) Strand=Plus/Minus Query 105529 GGACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATC 105588 |||||||| || ||| || |||| ||| || | |||||| || ||||| |||| | Sbjct 26293 GGACAAAATAAACTCCATTTCTCATCCTTTTCTACTCTTTTCATAAATAAATCGGGAACC 26234 Query 105589 CACATGGCTGAAAAGAGGTCTCGACACCTCGCCT--CTTCATCACCTTGATTCAAACGAA 105646 || | | |||| | ||||| |||| | |||| | || |||||| | | Sbjct 26233 CATAAACCATAAAACAAATCTCGTG--CTCGATTTTCTTCCTTTCCATGATTCTTTCTCA 26176 Query 105647 TTTCGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTT 105706 || | ||| || | ||||||||| ||||| || || ||||| | |||| || |||| Sbjct 26175 AATCTAAAAATTCAAAAATATCGGCATGCCAAGGCTCCAAATAAATAGCAAAAGCTCCTT 26116 Query 105707 TACGA---CGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTG 105763 | | | || |||||| ||||||||||| || ||| | ||||| | ||| | Sbjct 26115 TTCTTTTTCCTCCTCCTTGATCCACATATCTTGCAGTATCATTAAATACTCGAAGCATAG 26056 Query 105764 GAATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACAT 105823 ||| ||| |||| || |||||||| || || ||||||| ||||| ||||||||| || Sbjct 26055 GAACAATGCCATTAGAAGTTCCATTGGTACCTCGAATATAAGATTTGGTTGCACGTATAT 25996 Query 105824 CGTGAACGTGTAACCCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTG 105883 | ||||| || |||||||| ||||| | ||| ||| ||||| ||||| | Sbjct 25995 CATGAACTGCCAATCCAATACCACCAGCACTTTTAGAAATAACTGCACATCTTTTTAAAG 25936 Query 105884 TATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTT 105943 |||| ||||| || || || ||||| | | | | |||||||| || || | | Sbjct 25935 TATCATAAATTCCTTCAATGGAGTCTTCAGTCATAGTTAATAGGAAACAAGAGGATAACT 25876 Query 105944 GTGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 | ||||| || ||||| |||||||| | ||| |||| |||||| Sbjct 25875 GAGGTCTTGGAGTACCCGCATTGAATAAAGTAGGTGAAGCATGA 25832 >seq6 Length=291449 Score = 150 bits (166), Expect = 2e-31 Identities = 264/377 (70%), Gaps = 22/377 (6%) Strand=Plus/Plus Query 11278 CGATCAAATCTACCGGGGCGTAATAACGCATCGTCGAGTATATCGATACGGTTTGTTGCA 11337 |||||||| || || || |||||||| ||| ||| | || |||| ||| || ||||| Sbjct 226955 CGATCAAACCTTCCAGGACGTAATAATGCACGGTCTAATACATCGGAACGATTAGTTGCT 227014 Query 11338 CCTATAACAACAATTTCA--GTTTCATTCTCGAAACCATCCATTTCTGTTAATAATTGGT 11395 | ||||||| || || |||| ||| |||||| ||||||||||| | ||||||| Sbjct 227015 GCAATAACAATGATACCATTGTTTGCTTC--GAAACCGTCCATTTCTGTAAGCAATTGGT 227072 Query 11396 TAATTGTTTGTTCACGCTCATCGTTT---GCCGCAA-ACCCATTCATACTTCTTTTCTTA 11451 | | |||||||| | ||||| ||| |||||| ||| | | ||||| | || Sbjct 227073 TGAGAGTTTGTTCTCTTTCATCATTTCCGCCCGCAATACCGGCT----CCTCTTTGCCTA 227128 Query 11452 CCAATCGCATCAATTTCATCTATAAAGATAATACACGG----TTGATTTTCACGTGCCAA 11507 || | ||||| |||||||| ||||| |||||||| || || |||| | || Sbjct 227129 CCTACTGCATCTATTTCATCAATAAAAATAATACAAGGAGCATTCTTTTTGGCTTG---- 227184 Query 11508 TTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGA 11567 | |||||| |||||| || | | ||||| || || |||||||| ||||| ||| ||| Sbjct 227185 TGCAAATAAATCACGAACACGACTAGCGCCAACACCAACAAACATCTCAACAAACTCTGA 227244 Query 11568 CCCCGAACACTGA-ATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTG 11626 || | | | || | ||| || || | ||| || |||| ||| | ||| | |||| Sbjct 227245 ACCTGCA-ATAGACAAAAAGGGTACTCCTGCTTCTCCAGCTACAGCTCTTGCAAGTAGTG 227303 Query 11627 TTTTACCTGTACCTGGT 11643 |||| ||||| |||||| Sbjct 227304 TTTTTCCTGTTCCTGGT 227320 >seq26 Length=183063 Score = 104 bits (114), Expect = 3e-17 Identities = 330/504 (65%), Gaps = 6/504 (1%) Strand=Plus/Plus Query 115363 TGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCTGGAAGTAACCCT 115422 |||| ||||||||| || || || |||||| || || ||||| | | ||| Sbjct 77112 TGCAAACCTTCATCACGTGAAATAAGCTCATTAGAGAAGGTCAATCCTGGCATAAGTCCT 77171 Query 115423 CTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACACAC 115482 |||||||| |||||||| || | ||||||| ||| || || ||||| || || ||| Sbjct 77172 CTCTTTTTCAACCAAAATATGGAACAAAAAGAACCAGAAAAAAATATTCCCTCTACAGCA 77231 Query 115483 GCAAAGGCTAATAAACGTTCAGCAAATG-GTCGTTTCTTATCAAACCACTTCATAGCCCA 115541 ||||| || | |||||| |||||||| | | | | | | ||| | | |||||| Sbjct 77232 GCAAATGCCACTAAACGCTCAGCAAAAGAGGCAGAGGAT-TGGATCCATCTTAAAGCCCA 77290 Query 115542 TTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTTTC 115601 | |||||| | || ||||| ||||| || |||||||| ||||| | |||||| Sbjct 77291 CTGAGCCTTTTTCTCAATACAAGGAATACGTTCCATTGCTTCAAATAAACGAGCCTTTTC 77350 Query 115602 GCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATTT- 115660 || || | ||||| | || || || | || ||||| || | ||| Sbjct 77351 TTGAGCATCTCGAATATAAGTATCGATAAGAAGAGAATAAGTTTCCGAATGAATATTTTC 77410 Query 115661 CATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCAA 115720 ||||| | |||| | ||||||| |||| || || | || || | ||| | ||| Sbjct 77411 CATTGCTA-TTTGAAATCCATAAAAACATCGTGCTTCTGGAATCTGGACATCA-CGACAA 77468 Query 115721 AATTATTAT-TTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAATA 115779 ||| || | | || || ||||| || || || ||| ||||| ||||| || | Sbjct 77469 AATCTTTCTGCAAGGTTCTCCAAAACAATTCCGTCGGAAGATGCAAAGAAAGCCAATACG 77528 Query 115780 TATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAATCATCCATATCTTTGGAA 115839 | || ||||| |||| || | |||| |||||||| |||| || | || Sbjct 77529 TGAGAAATGAAATGGCGCTCATCTGCATTCAATTTCTTCCAATCTTCCAAGTCACTCGAT 77588 Query 115840 AAGTCTATCTCTTCAGCGGTCCAA 115863 || ||||| |||||||| |||||| Sbjct 77589 AAATCTATTTCTTCAGCAGTCCAA 77612 >seq1 Length=465833 Score = 96.9 bits (106), Expect = 4e-15 Identities = 282/427 (66%), Gaps = 12/427 (3%) Strand=Plus/Plus Query 183159 ATCCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAAT 183218 |||| ||||| |||||||||| || || || |||||| || | |||||| ||||| Sbjct 41536 ATCCAGTACCGATACCTTCAGCACCGTTCACTAAAACGAGAGGAATAATAGGACAATAAT 41595 Query 183219 AGTCAGGTTCGATTTGTTTACCGTCGTCGTCGAGATAGTTTAATACTGGATCATCTTTGG 183278 | | ||||| || | || || || || | ||||| | ||| | ||||||| | Sbjct 41596 AATTGGGTTCAATCGATAGTCCATCTTCTTCTAAATAGTGAAGTACGGCATCATCT---G 41652 Query 183279 GATCAA-AAAGTATTCTCGCGTTTTTAGT-CAATTTTG-TAAATATATACCTGGTTTGAC 183335 || |||| | || || | | ||| | || |||||||||| | | | Sbjct 41653 CTTCTGGAAAGAGATAACGTGTAATGGGAGCAAGTCTGGTAAATATATAACGAGCAGAAG 41712 Query 183336 TCGCGTCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAA 183395 |||||||| || || | ||| |||||||| ||||| | || | | | ||| | Sbjct 41713 CAGCGTCTTTTCCGCCTTGTAAACGAGTACCAAACTGACCGGAAGGAACCAAAAGATTGA 41772 Query 183396 TATTATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAA-AGAGAC- 183453 ||||| || || |||||| ||||| ||| |||||| || ||||| |||||| Sbjct 41773 TATTACACGCACCTACAAAATTTTGTGCCAATCCTACAATCGT---TGCCATGAGAGACA 41829 Query 183454 -TTCACCGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCA 183512 ||| || || ||||| | || ||||| | | || |||| ||||||||||| || | Sbjct 41830 TTTCTCCATGATGATAAGCTGCATTTTCTGCTATATAACCGGCCAATTGCGCAACTTTGA 41889 Query 183513 TTTCAGATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTA 183572 | || || | |||||| | || || | |||| ||||| ||||| ||||| | Sbjct 41890 TATCTCTCGTCAACTTCTTTTTAAAGCAGCCAAATAAAACTTTACGTTGACTAGGTTTCA 41949 Query 183573 AACCATC 183579 ||||||| Sbjct 41950 AACCATC 41956 Score = 89.7 bits (98), Expect = 7e-13 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 184241 AGCGGAAAAACACCGTAATGATCACGACCAACAACTGAAAGACCAGCAATTGCAAGTGTT 184300 |||||||||||||| || | |||||||| || ||||| | ||| | || ||| |||| | Sbjct 42726 AGCGGAAAAACACCATAGTAGTCACGACCTACTACTGATAAACCCGAAACTGCCAGTGCT 42785 Query 184301 TTTGCAGAATCACCTTCGGTAATAATAAGAGTACACTTACCAGAGTGTGTGGTACCGGCT 184360 || |||||||| ||||| || | ||| | |||||| | | || | | || || || Sbjct 42786 TTCGCAGAATCTCCTTCTGTCAGAATCAAAGTACAGTAAAAGGATTCCTTTGTTCCAGCA 42845 Query 184361 TTATTGGCATCGTCGAGTTTTGGAATACC 184389 | ||| ||||| || | ||||| ||||| Sbjct 42846 TAATTCGCATCATCCAACTTTGGTATACC 42874 >seq62 Length=89227 Score = 82.4 bits (90), Expect = 1e-10 Identities = 113/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 115351 GCAAATTCTTGGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACCT 115410 |||||||| |||| ||||||||||| ||| | ||||| ||| | ||| Sbjct 48135 GCAAATTCACAATGCAAGCCTTCATCTCGTGATATCAACTCATTGGAGAAAGTAAGACCA 48194 Query 115411 GGAAGTAACCCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATA 115470 || | || || | || ||||||||||| || | ||||||| ||| || |||||||| Sbjct 48195 GGCATCAAGCCCCGTTTCTTTAACCAAAATATGGAACAAAAAGAACCAGAAAAGAATATC 48254 Query 115471 CCTTCAACACACGCAAAGGCTAATAAACGTTCAGCAAA 115508 ||||| || |||||||| | |||||| |||||||| Sbjct 48255 CCTTCTACTGCTGCAAAGGCAACTAAACGCTCAGCAAA 48292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129362343720