Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq26 131 2e-25 seq62 98.7 1e-15 seq19 98.7 1e-15 >seq26 Length=183063 Score = 131 bits (144), Expect = 2e-25 Identities = 343/516 (66%), Gaps = 8/516 (2%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 ||||| || ||| | |||||||| || || || ||||||||| |||| | ||| Sbjct 77100 GCAAAGTCACAATGCAAACCTTCATCACGTGAAATAAGCTCATTAGAGAAGGTCAATCCT 77159 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| |||||||| || || | |||||| |||| ||||||| |||||||| || || Sbjct 77160 GGCATAAGTCCTCTCTTTTTCAACCAAAATATGGAACAAAAAGAACCAGAAAAAAATATT 77219 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAA--AGGTCGAGACTTGTCGAACC 119673 ||||| ||| || || || | || |||||||||||| ||| ||| ||| || || Sbjct 77220 CCCTCTACAGCAGCAAATGCCACTAAACGCTCAGCAAAAGAGGCAGAGGATTG--GATCC 77277 Query 119674 ACTTGAGAGCCCAGTTGGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAA 119733 | | | |||||| | ||||| ||| || || || | | || || ||||| || | Sbjct 77278 ATCTTAAAGCCCACTGAGCCTTTTTCTCAATACAAGGAATACGTTCCATTGCTTCAAATA 77337 Query 119734 GTTGCTTCTTTTCAGCACCATCCTTAATATATTTATCAATGAGTTTAGAGTAGGTCTCAC 119793 | |||||| | |||| |||||| |||| || || ||| || || || Sbjct 77338 AACGAGCCTTTTCTTGAGCATCTCGAATATAAGTATCGATAAGAAGAGAATAAGTTTCCG 77397 Query 119794 CATGAACCATTT-CATTGTGTGACTGATAGGCATAAAATGAGCGAGCTTCGGAAATTTGC 119852 ||||| ||| ||||| | ||| | ||||||| | || ||||| | ||| || Sbjct 77398 AATGAATATTTTCCATTG-CTATTTGAAATCCATAAAAACATCGTGCTTCTGGAATCTGG 77456 Query 119853 ACTTCGTCAGCAAAATTGTTGT-TGATATTTTCAAAAACAATTCCATCGGATCCAGCGAA 119911 || || | |||||| || | | || || ||||||||||| ||||| || || Sbjct 77457 ACATC-ACGACAAAATCTTTCTGCAAGGTTCTCCAAAACAATTCCGTCGGAAGATGCAAA 77515 Query 119912 GAATGCTAAGATGTACTTTATGAATTTCTGTTCATTATCGTTGAGTGTTTTCCAGTCGTC 119971 ||| || || | || ||||| | | |||| | || | | | ||||| || || Sbjct 77516 GAAAGCCAATACGTGAGAAATGAAATGGCGCTCATCTGCATTCAATTTCTTCCAATCTTC 77575 Query 119972 CATATCTTTAGACAAGTCCACCTCTTCAGCTGTCCA 120007 || || | || || || | |||||||| ||||| Sbjct 77576 CAAGTCACTCGATAAATCTATTTCTTCAGCAGTCCA 77611 >seq62 Length=89227 Score = 98.7 bits (108), Expect = 1e-15 Identities = 117/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 119496 GCAAATTCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCA 119555 |||||||| ||| | |||||||| || || || | |||||| ||| ||| ||| Sbjct 48135 GCAAATTCACAATGCAAGCCTTCATCTCGTGATATCAACTCATTGGAGAAAGTAAGACCA 48194 Query 119556 GGCATGAGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATG 119615 ||||| | || | |||||||| |||||| |||| ||||||| ||||||||||| || Sbjct 48195 GGCATCAAGCCCCGTTTCTTTAACCAAAATATGGAACAAAAAGAACCAGAAAAGAATATC 48254 Query 119616 CCCTCCACACAGGCGAAAGCGAATAGACGCTCAGCAAAA 119654 || || || || || || | || ||||||||||||| Sbjct 48255 CCTTCTACTGCTGCAAAGGCAACTAAACGCTCAGCAAAA 48293 >seq19 Length=190679 Score = 98.7 bits (108), Expect = 1e-15 Identities = 256/389 (66%), Gaps = 6/389 (2%) Strand=Plus/Minus Query 110776 ACATAGCGTGCTGTGGCATTGAAGACCCTGAGCATAGGAATAATTCCATCGGATTGACCA 110835 ||||| | ||| || |||| || || | |||||||||| ||| |||| || ||| Sbjct 26092 ACATATCTTGCAGTATCATTAAATACTCGAAGCATAGGAACAATGCCATTAGAAGTTCCA 26033 Query 110836 TTTGTACCCCTAATTCTGGACTTATTGGCACGAATGTCGTGGATATGCATACCAATACCA 110895 || ||||| | ||| || || | ||||| || || || | || ||||||||| Sbjct 26032 TTGGTACCTCGAATATAAGATTTGGTTGCACGTATATCATGAACTGCCAATCCAATACCA 25973 Query 110896 CCCGCCCACTTACTAATTTGTGCACACTCTGTGAGTGTACCATAAATACCATCAATCGAA 110955 || || | ||| ||| |||||| | | | ||| ||||||| || ||||| || Sbjct 25972 CCAGCACTTTTAGAAATAACTGCACATCTTTTTAAAGTATCATAAATTCCTTCAATGGAG 25913 Query 110956 TCTGCCTTGTTGGCAATTAGAAAGCAAGAAGACATCTGAGGACGAGGCGTTCCCGCATTG 111015 ||| | | | | | ||| || ||||| || | |||||| | || || ||||||||| Sbjct 25912 TCTTCAGTCATAGTTAATAGGAAACAAGAGGATAACTGAGGTCTTGGAGTACCCGCATTG 25853 Query 111016 AAGAGTGTAGGTGTCGCATGAATGAACAGACCTTGGGACATCTTGTTGTATGTGTCGAGT 111075 || | ||||||| |||||| | || | | ||||| | | || || || | | Sbjct 25852 AATAAAGTAGGTGAAGCATGAGTAAAGTATTTTCGAGACATATAATCATAAGTCTCCAAT 25793 Query 111076 GCGGAGGGTA---CATCTTTACCGTGAATACCAATGGCAACTCGCATGAACATATATTGA 111132 | | | |||| || ||||||||||| || |||| ||| ||||||| ||| Sbjct 25792 ACTGCTTCCAAGTCATCCTT---GTGAATACCAACAGCTACTCTCATCAACATATGTTGT 25736 Query 111133 GGCGTTTCGATTAGCTTTCCATCAACACG 111161 || ||| || | || ||||| ||||| Sbjct 25735 GGTCGTTCTATCACTTTGCCATCCACACG 25707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588972812167400