Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq36 513 2e-140 >seq36 Length=158315 Score = 513 bits (568), Expect = 2e-140 Identities = 703/977 (72%), Gaps = 4/977 (0%) Strand=Plus/Minus Query 168500 TGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCA 168559 ||| | || ||||| | || | || || | |||||||| || || ||||||||||| Sbjct 27756 TGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTTGGAGTATTAATGATCCCT 27697 Query 168560 TGTTTATTAACAGCAGCAGCATGT-TTCATTGTTGCATTTATTGCTGCACCACCTGTCGA 168618 ||| ||||||| || | ||| || || ||| |||||| ||||| ||||| || || Sbjct 27696 ACATTACTAACAGCTACATC-TGTATTTATAATTGGATTTATAGCTGCTCCACCAGTTGA 27638 Query 168619 TATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTC 168678 ||| ||||| || |||||||| || |||| | | | |||||||| || || || | Sbjct 27637 TATAGACGGTATTAGAGAACCAGTTTCAGGATCATTGTTATATGGAAATAATATTATAAC 27578 Query 168679 AGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGC 168738 ||||| |||| || | || || ||||| || |||| ||||| || ||||||||||| Sbjct 27577 TGGTGCTATTGTACCTACATCTAATGCAATAGGAATACATTTCTATCCTATTTGGGAAGC 27518 Query 168739 AGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTAATCTTCCACTT 168798 ||| | | ||||| ||| |||||||||| |||||||| | || || | || ||||| Sbjct 27517 AGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTATGAATTAATAGTTTTGCACTT 27458 Query 168799 CCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATACAGACTAGGTAT 168858 | | || ||||| | ||| || ||||| | | ||||||||| || | || || || Sbjct 27457 CTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAATTAAGCTATCGTCTTGGAAT 27398 Query 168859 GAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTTGCAGTATTCCT 168918 | | |||||||| || |||| ||||| || || ||||||| || ||||| | Sbjct 27397 GCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCTGCAGCCACAGCTGTATTTAT 27338 Query 168919 TGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGAATTTCTGGAAC 168978 | | || || |||| || ||| ||| || ||||||||||| |||| |||||||| || Sbjct 27337 TATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATGCCATTAGGTATTTCTGGTAC 27278 Query 168979 ATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATAT 169038 || || || ||||| || |||||||| || || || ||| | |||||||| || ||||| Sbjct 27277 TTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATTTTAATGCATCCGTTTCATAT 27218 Query 169039 GGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGT 169098 | || || || ||| | || || || || |||| |||||||| || || ||||| Sbjct 27217 GATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGTGCAATGCACGGCTCTCTTGT 27158 Query 169099 AACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTT 169158 ||| || | | || | || || || ||| | || ||| ||| ||||||| || || Sbjct 27157 AACTTCAAGTTTGATACGTGAAACAACAGAGAATGAGTCTGCAAACAATGGTTATAAATT 27098 Query 169159 CGGTCAAGAAGAAGAAACCTATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAAT 169218 || |||||| | ||||| ||||| || ||||| || ||||| || || || |||||||| Sbjct 27097 TGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCATGGTTATTTTGGAAGATTAAT 27038 Query 169219 CTTCCAGTATGCAAGTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTGTTCCC 169278 ||||| |||||||| || || || ||| | | || |||||| |||| | | || Sbjct 27037 TTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACATTTCTTCTTAGCTTTATGGCC 26978 Query 169279 AGTTGTATGTGTATGGTTAACCTCTATGGGTATCTGTACAATGGCATTCAACTTGAACGG 169338 ||| |||||| | ||| | || ||| | |||||| | ||||||||||| ||||| || || Sbjct 26977 AGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCACAATGGCATTTAACTTAAATGG 26918 Query 169339 ATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGA-TCATTCCTACATGGGGTG 169397 |||||| ||||| ||||| ||||| ||| | | || |||| | ||| ||| |||| || Sbjct 26917 ATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGG-AAGAGTAATTAATACTTGGGCTG 26859 Query 169398 ACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCACAACT 169457 | | | || | ||||| | || || |||||||||||||| ||||| || || |||| Sbjct 26858 ATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCATGAACGTAATGCACATAACT 26799 Query 169458 TCCCACTAGACTTAGCA 169474 | || ||||| |||||| Sbjct 26798 TTCCTCTAGATTTAGCA 26782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564438544959840