Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq36 426 2e-114 >seq36 Length=158315 Score = 426 bits (472), Expect = 2e-114 Identities = 701/1011 (69%), Gaps = 0/1011 (0%) Strand=Plus/Minus Query 215294 TTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTC 215353 |||||| ||| ||||| || || |||||| ||||| | ||||||||||| || | Sbjct 27765 TTTTGTTCTTGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTTGGAGTATTA 27706 Query 215354 ATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCT 215413 ||||| ||| | || ||||||| || || || | | ||| || ||||| || Sbjct 27705 ATGATCCCTACATTACTAACAGCTACATCTGTATTTATAATTGGATTTATAGCTGCTCCA 27646 Query 215414 CCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAAC 215473 || || ||||| ||||| || ||||| |||||| | || || || | ||||| || || Sbjct 27645 CCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATCATTGTTATATGGAAATAAT 27586 Query 215474 ATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATC 215533 || || |||||||| ||||||||| || || ||||| ||| |||| ||||| ||||| Sbjct 27585 ATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGGAATACATTTCTATCCTATT 27526 Query 215534 TGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAACTGGTTATC 215593 |||||||||||| | | || |||||||| || ||||| || |||| || | | | Sbjct 27525 TGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTATGAATTAATAGTT 27466 Query 215594 TTCCACTTCCTCATTGGTATTTCTGCATACTGCGGAAGACAGTGGGAACTTTCTTACAGA 215653 || |||||| | ||||| |||| |||||| ||| | | |||||| | || | Sbjct 27465 TTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAATTAAGCTATCGT 27406 Query 215654 TTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCTGCCTTTGCA 215713 | || ||| | |||||||| || |||| ||| || ||||| |||| ||| || Sbjct 27405 CTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCTGCAGCCACAGCT 27346 Query 215714 GTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGAATC 215773 ||||| || | ||||| | || || ||| ||| || |||| ||||||| | || || Sbjct 27345 GTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATGCCATTAGGTATT 27286 Query 215774 TCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCACCCA 215833 ||||| || || || | ||||| |||||||| ||||| || || ||| | ||||| || Sbjct 27285 TCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATTTTAATGCATCCG 27226 Query 215834 TTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTGCAATGCACGGT 215893 || || ||| | ||||| |||||||| || || |||||||| || |||||||||||| Sbjct 27225 TTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGTGCAATGCACGGC 27166 Query 215894 TCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTCAGAACTACGGT 215953 || ||||| || || | | || | || ||||| ||| | || ||| ||| | ||| Sbjct 27165 TCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAATGAGTCTGCAAACAATGGT 27106 Query 215954 TACAAGTTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGT 216013 || || || || ||||| | ||||| || |||||||| ||||| || ||||| ||||| Sbjct 27105 TATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCATGGTTATTTTGGA 27046 Query 216014 CGCCTCATCTTCCAATACGCATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCA 216073 | | || |||||||| ||| || || || ||| | | || |||||| | || Sbjct 27045 AGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACATTTCTTCTTAGCT 26986 Query 216074 GCATTCCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAAC 216133 || || || | ||||| ||| || | | ||| || || ||||| || ||| Sbjct 26985 TTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCACAATGGCATTTAAC 26926 Query 216134 CTTAACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACT 216193 | || || || || || || || ||||| || || | || | ||| ||| |||| Sbjct 26925 TTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGAAGAGTAATTAATACT 26866 Query 216194 TGGGCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCT 216253 ||||| || || | || | ||| | || || ||||||||||| || ||||| || Sbjct 26865 TGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCATGAACGTAATGCA 26806 Query 216254 CACAACTTCCCATTAGACTTGGCTGCTGCTGAATCAACACCAGTTGCTTTA 216304 || ||||| || |||| || || || | ||| ||||||||||||| Sbjct 26805 CATAACTTTCCTCTAGATTTAGCAAGTGAAGTATCTTTACCAGTTGCTTTA 26755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 745077567245840