Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_015289.1 Length=176184 Score E Sequences producing significant alignments: (Bits) Value seq36 551 6e-152 >seq36 Length=158315 Score = 551 bits (610), Expect = 6e-152 Identities = 740/1027 (72%), Gaps = 2/1027 (0%) Strand=Plus/Plus Query 166152 AGGGGGTGGTTCGATGTCCTTGACGACTGGCTTAAACGAGATCGTTTCGTTTTTGTTGGT 166211 || ||||||||||| | |||| || ||||| ||||| ||||| || || ||| |||| Sbjct 39768 AGAGGGTGGTTCGACTTAGTTGATGATTGGCTAAAACGTGATCGATTTGTCTTTATTGGA 39827 Query 166212 TGGTCTGGACTTCTTCTTCTTCCCACTGCTTATCTTGCTATTGGCGGTTGGCTCACTGGG 166271 ||||| || | || ||| |||| | | ||||| ||| | || | ||| | || || Sbjct 39828 TGGTCAGGTTTGCTACTTTTTCCATGTTCATATCTAGCTCTAGGTGCCTGGTTTACAGGT 39887 Query 166272 ACTACTTTCGTCACGAGTTGGTATACTCATGGACTCGCAAGCAGTTATCTGGAGGGTGCA 166331 || ||||| || || ||||||||| ||||| | || |||| | || || Sbjct 39888 ACAACTTTTGTTACTTCTTGGTATACGCATGGTTTAGCTTCTTCTTATTTAGAAGGATGT 39947 Query 166332 AACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGATGCTATGGGTCATTCTCTACTTCTT 166391 || ||| | || || ||||| || | ||| ||| || |||||| || || || | || Sbjct 39948 AATTTTTTAACCGCTGCAGTATCAAGTCCTGCAAATAGTATGGGACACTCATTATTATTT 40007 Query 166392 CTCTGGGGTCCTGAGGCTCAAGGGGATTTCGTCAGGTGGTGCCAACTTGGAGGGCTTTGG 166451 | ||||| || || |||||||| ||||| || ||||| ||| ||||||| |||||| Sbjct 40008 TTATGGGGACCAGAAGCTCAAGGTGATTTTACTAGATGGTGTCAAATTGGAGGTCTTTGG 40067 Query 166452 GCCTTTGTTGCTCTCCACGGTGCTTTTGCCCTAATTGGTTTCATGCTT-CGGCAGTTTGA 166510 | ||| |||| | || |||||||||||| | || ||||| || || || || ||||| Sbjct 40068 ACTTTTACTGCTTTACATGGTGCTTTTGCCTTGATAGGTTT-TTGTTTGCGTCAATTTGA 40126 Query 166511 AATCGCTCGTCTAGTAGGTATTCGTCCGTACAATGCAATCGCTTTTTCTGGTCCTATTGC 166570 ||| || | |||| || ||| | || ||||||||||| |||||||| || || ||||| Sbjct 40127 AATAGCCAGATTAGTCGGAATTAGGCCATACAATGCAATAGCTTTTTCAGGACCAATTGC 40186 Query 166571 TGTCTTCGTTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTTTTCGCTCC 166630 || || ||| || ||||| || || || || || ||| | ||||||||||| ||||| Sbjct 40187 AGTTTTTGTTTCAGTATTTCTTATTTATCCACTTGGGCAAGCTAGTTGGTTTTTTGCTCC 40246 Query 166631 ATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTCCTTTTCCTTCAAGGATTCCACAACTG 166690 ||| || || |||| ||||| ||||| | | || | ||||| ||||| || || Sbjct 40247 TAGTTTTGGAGTTGCAGCTATCTTTCGATTTATTTTATTTTTACAAGGTTTCCATAATTG 40306 Query 166691 GACACTGAACCCATTTCATATGATGGGTGTAGCAGGTATTCTCGGTGGTGCATTGCTTTC 166750 ||| | || |||||||||||||||||||| || || || ||||| || ||||| |||| Sbjct 40307 GACTTTAAATCCATTTCATATGATGGGTGTTGCTGGAATACTCGGAGGAGCATTACTTTG 40366 Query 166751 TGCCATCCATGGTGTTACAGTAGAGAACACTCTGTATCAAGATGGTGAACAGGCAAATAC 166810 ||| || ||||| | || |||||||| || | | ||||||| ||| || ||||| Sbjct 40367 TGCTATTCATGGAGCGACTGTAGAGAATACATTATTCGAAGATGGCGAAGCTGCTAATAC 40426 Query 166811 TTTCAAGGCATTCGACTCTACTCAAGAGGAAGAAACCTATTCAATGGTTACAGCAAACCG 166870 ||||| ||| || | || ||| || ||||| |||||||||||||| || || || Sbjct 40427 TTTCAGGGCTTTTACACCAACACAATCAGAGGAAACTTATTCAATGGTTACGGCTAATCG 40486 Query 166871 CTATTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGTTGCATTTCTTTAT 166930 | |||||| || || || ||| |||| ||| ||| || || ||| | ||||| ||||| Sbjct 40487 TTTTTGGTCACAAATTTTTGGTGTTGCATTTTCTAACAAAAGATGGCTACATTTTTTTAT 40546 Query 166931 GCTGTTTGTTCCTGTTATGGGTCTGTGGACAAGTTCCATCGGTATTATTGGTCTTGCTCT 166990 ||| ||||| || |||| || | |||||||| || || ||||| || || ||||| | Sbjct 40547 GCTATTTGTGCCAGTTACAGGATTATGGACAAGCTCTATTGGTATCATAGGACTTGCATT 40606 Query 166991 CAACCTTCGTGCTTATGACTTTGTTTCCCAAGAACTAAGGGCAGCAGAGGATCCTGAGTT 167050 || | ||||| ||||| ||||| || |||||| || | || |||||||| || || || Sbjct 40607 AAATTTACGTGCATATGATTTTGTCTCTCAAGAATTACGTGCCGCAGAGGACCCAGAATT 40666 Query 167051 TGAAACCTTCTATACCAAGAACATTCTCTTGAATGAGGGTATGCGTTCTTGGATGGCAAC 167110 ||| || || ||||| || || | || | ||||| ||||| | | ||||||||||| Sbjct 40667 TGAGACTTTTTATACTAAAAATTTACTTCTAAATGAAGGTATAAGAGCATGGATGGCAAC 40726 Query 167111 TATCGATCAACCTCATGAGAGTTTCGTATTCCCTGAAGAGGTTCTTCCTAGAGGTAACGC 167170 |||||||| ||||| | ||| |||||||| || |||||| | || | || || || Sbjct 40727 ACAAGATCAACCACATGAAAATTTTGTATTCCCAGAGGAGGTTTTACCACGTGGAAATGC 40786 Query 167171 TCTCTAA 167177 || ||| Sbjct 40787 CCTTTAA 40793 Score = 488 bits (540), Expect = 6e-133 Identities = 702/987 (71%), Gaps = 2/987 (0%) Strand=Plus/Minus Query 164755 TGGGAGTCTTTTTGCGAGTGGGTGACTTCCACCAATAACCGTCTTTATGTCGGTTGGTTC 164814 ||||| |||||| ||| | ||| ||| | || ||||| || | |||||||| Sbjct 27774 TGGGAACGTTTTTGTTCTTGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTT 27715 Query 164815 GGTGTTCTTATGATCCCCTGTTTGCTCGCCGCTACAATTTGT-TTTATTACTGCATTCAT 164873 || || | |||||||| || || | |||||| | ||| ||||| | || ||| || Sbjct 27714 GGAGTATTAATGATCCCTACATTACTAACAGCTACA-TCTGTATTTATAATTGGATTTAT 27656 Query 164874 CGCTGCTCCCCCTGTGGACATTGATGGTATTCGTGAACCTGTCGCAGGTTCTCTAATGTA 164933 |||||||| || || || || || |||||| | ||||| || |||| || | | || Sbjct 27655 AGCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATCATTGTTATA 27596 Query 164934 CGGTAACAACATCATCTCTGGTGCTGTCGTTCCGTCTTCTAACGCAATCGGACTTCACTT 164993 || || || || || |||||||| | || || | ||||| ||||| ||| | || || Sbjct 27595 TGGAAATAATATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGGAATACATTT 27536 Query 164994 CTATCCTATTTGGGAAGCTGCAACCATGGATGAATGGTTGTACAACGGTGGTCCTTACCA 165053 |||||||||||||||||| ||| | | ||||||||| | || || || |||||||| | Sbjct 27535 CTATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTATGA 27476 Query 165054 GTTGGTTGTCTTCCACTTCCTCATCGGTGTAGCTTGCTACATGGGTCGTGAGTGGGAACT 165113 || | || || |||||| | || || | | || ||||| ||||| |||||| | Sbjct 27475 ATTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAATT 27416 Query 165114 GTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATATAGCGCACCTGTCGCTGC 165173 || || || || |||||||||||||| |||||| | || ||||| ||||| Sbjct 27415 AAGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCTGC 27356 Query 165174 TGCTGCCGCAGTTTTCCTGGTCTATCCTTTCGGTCAAGGGAGTTTCTCTGATGGTATGCC 165233 || | || || || | |||||||| | || ||||| ||||| || ||||||||||| Sbjct 27355 AGCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATGCC 27296 Query 165234 TCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTCTTCCAAGCAGAACATAACATTCT 165293 | ||||| |||||||||||||| | |||||| || |||||||| |||||||| ||| | Sbjct 27295 ATTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATTTT 27236 Query 165294 TATGCATCCGTTCCACATGCTCGGCGTTGCTGGGGTATTCGGTGGATCTCTTTTCTCTGC 165353 ||||||||||| || ||| | || |||||||| ||||| || || || | || ||| Sbjct 27235 AATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGTGC 27176 Query 165354 TATGCATGGAAGTCTTGTTACTTCCTCACTCGTCCGCGAGACAACTGAAACAGAGAGTCA 165413 ||||| || |||||| ||||| | | || || ||||| || | ||| | Sbjct 27175 AATGCACGGCTCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAATGAGTCTGC 27116 Query 165414 GAACTACGGTTATAAGTTTGGACAAGAAGAAGAGACCTATAACATCGTCGCTGCCCACGG 165473 ||| | |||||||| ||||| |||||| | || || ||||||||||| ||||| || || Sbjct 27115 AAACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCATGG 27056 Query 165474 GTACTTCGGTCGTCTCATTTTCCAATACGCATCCTTCAACAATTCCCGTTCGCTGCACTT 165533 || || || | | ||||||||||| ||| ||| || ||||| || || | || || Sbjct 27055 TTATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACATTT 26996 Query 165534 CTTCCTCGCAGCATGGCCTGTAGTTGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCAT 165593 |||| | || |||||| ||||| |||| ||| |||| || | ||| | ||||| || Sbjct 26995 CTTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCACAAT 26936 Query 165594 GGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCTATTGTTGATAGTCAGAACAAAAT 165653 |||||| ||| | || || || || || || || ||| |||||||| ||| | | | Sbjct 26935 GGCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGAAGAGT 26876 Query 165654 CATCCCTACTTGGGCTGACGTTCTGAACCGTGCTGGTCTGGGTATGGAAGTTATGCATGA 165713 || |||||||||||| || | || ||||| | | || || ||||| |||||||| Sbjct 26875 AATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCATGA 26816 Query 165714 GCGTAACGCTCACAACTTCCCCCTCGA 165740 ||||| || || ||||| || || || Sbjct 26815 ACGTAATGCACATAACTTTCCTCTAGA 26789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563657749185920