Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq36 529 2e-145 >seq36 Length=158315 Score = 529 bits (586), Expect = 2e-145 Identities = 686/945 (73%), Gaps = 2/945 (0%) Strand=Plus/Plus Query 83985 GGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCGGCACGATTAAGT 84044 || ||||||||||| |||||||| ||||| ||||| || || | |||||||| | Sbjct 26795 GGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATTTGCACGATTTAAA 26854 Query 84045 ACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTCTGATTGAAGTTA 84104 | ||| ||||| ||||| | || | ||| ||| |||| | ||||| || ||| Sbjct 26855 ATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGATTGATTAAAATTA 26914 Query 84105 AATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACC 84164 |||||||| | ||||||||||| ||||| | ||| | || | | |||||| | || Sbjct 26915 AATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAGCCAAATACATACT 26974 Query 84165 ACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGG 84224 |||||||| ||| ||||| || || | || || ||| || ||| ||||| ||| Sbjct 26975 ACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAATTATTAAAGCTTGCATATTGG 27034 Query 84225 AAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGA 84284 || || | | || || || || ||||||||||| || ||||||||||| | |||||| Sbjct 27035 AAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAGTTTCATATTCTTGG 27094 Query 84285 CCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAA 84344 || || || ||||||| |||| || |||| ||||| ||||| || || | | ||| Sbjct 27095 CCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCACGTATCAAACTTGAA 27154 Query 84345 GTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCC 84404 || ||||| || || ||||||||| |||| | || || |||||||||||||| ||| Sbjct 27155 GTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAATACACCAGCAACACCC 27214 Query 84405 AACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGACAAGCATGTAGTTG 84464 | ||| ||||| |||||||| | || |||||||| || ||||| || | ||| | || Sbjct 27215 ATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAAACTAACATAAAATTA 27274 Query 84465 AACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCCGAAAGGATAC 84524 || || || || ||||| | |||||| ||||| || ||| |||||| || | |||||| Sbjct 27275 AAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCTTGTCCAATAGGATAG 27334 Query 84525 ACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACAGATCCATGGA 84584 | || |||||||| | || || ||||| ||||| ||| |||| || ||||| ||| Sbjct 27335 ATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCTACGGCTATCCAAGGA 27394 Query 84585 CGCATACCGAGACGATATGAAAGTTCCCATTCACGACCCATGTAAGCAAATGCACCAATC 84644 ||||| || |||||||| | |||||||||||| ||||| || ||| | ||||| Sbjct 27395 CGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATATGCACAAATTCCAATA 27454 Query 84645 AGGAAGTGAAAGACAACAAGTTGATAAGGTCCACCATTATATAGCCATTCGTCCATACTT 84704 | |||||| || || | | || |||||| || ||||||||||||||||| || | | | Sbjct 27455 AAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGCCATTCATCTAAAGAT 27514 Query 84705 GCTGCTTCCCAAATAGGATAGAAATGTAGACCAATAGCATTAGAGGATGGAACTACGGCA 84764 |||||||||||||||||||||||||||| || || |||||||| | || || | ||| Sbjct 27515 GCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGATGTAGGTACAATAGCA 27574 Query 84765 CCAGAAATGATGTTGTTTCCGTACATGAGAGAACCAGCGACTGGCTCACGGATACCGTCA 84824 |||| || || || ||||| || | | || || | ||||| || | |||||||| Sbjct 27575 CCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGTTCTCTAATACCGTCT 27634 Query 84825 ATATCAACTGGGGGTGCACCAACGAATGCAATGATGAA-ACAGACAGTGGCAGCAAGTAG 84883 ||||||||||| || ||| | | ||| |||| || || ||||| || || | |||| Sbjct 27635 ATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACAGA-TGTAGCTGTTAGTAA 27693 Query 84884 AGTTGGAATCATAAGAGTTCCAAACCAACCAACATAGATACGGTT 84928 || || ||||| | |||||||||||| | |||| ||| || Sbjct 27694 TGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGATT 27738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571270507981640