Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq11 262 3e-64 seq12 244 9e-59 seq36 196 4e-44 seq51 136 3e-26 seq54 129 5e-24 seq6 123 2e-22 seq48 111 1e-18 >seq11 Length=227306 Score = 262 bits (290), Expect = 3e-64 Identities = 614/905 (68%), Gaps = 26/905 (3%) Strand=Plus/Plus Query 551735 TGACGTAACTCTTCTATCTCTCGAAGATGGTCTCTTTTCTGTATTAGCTACTAGTGGAGA 551794 |||||| ||||| ||||| | || || ||| ||||| ||| || ||| |||||| Sbjct 102720 TGACGTTTCTCTTTTATCTATTGATGAAGGTGTCTTTGAAGTAAAGGCAACTGCTGGAGA 102779 Query 551795 TTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA-GATT 551853 | |||| | || || |||||||||||||| || ||||| | | | || || || | Sbjct 102780 TACTCACTTGGGAGGAGAAGATTTTGATAACAGGCTGGT-TGACTATCTGGCAAAAGAGT 102838 Query 551854 TTAAACGAAAAAACAAAGTTGATCTATCTACATC---TGCCAAAGCTCTTCGTCGTCTAA 551910 | ||||||||| | || ||| ||| ||||| | | ||| | | | || Sbjct 102839 TCAAACGAAAATATAACAAGGAT--ATC-ACATCCAATCACCGCGCTATGAGAAGGCTTC 102895 Query 551911 GAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAG 551970 | || ||||| || ||||| ||| || | || ||| || || ||||| |||||||||| Sbjct 102896 GTACAGCTTGTGAGAGAGCTAAAAGAACCCTCTCAAGTGCAACCCAAACAACTATTGAAG 102955 Query 551971 TAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAG 552030 | ||||| | | || || ||||| | | | || |||| |||| ||||| ||||||| Sbjct 102956 TGGATTCTCTCTACGAAGGCATTGACTTTTACACCAGTATTACGAGAGCCAAGTTTGAAG 103015 Query 552031 ATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT-TTAAGAGAT 552089 | | ||| ||| | || | || || || || || || |||| ||||| || Sbjct 103016 ACTTGTGTATGGATTTGTTCCGCAAGTGCATAGATCCCGTCGAGAGAGTTATTAAG-GAC 103074 Query 552090 TCAAAGATTGAT---AAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 || |||| || | | |||| | ||||| |||| | || || || || || || Sbjct 103075 TCTG-GATT-ATCCAAGAGTCAAATT-CATGATGTTGTTTTGGTAGGAGGTTCGACTCGA 103131 Query 552147 ATTCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAA 552204 ||||| ||| ||| || | || ||| ||| ||||||||| || | | | | Sbjct 103132 ATTCCAAAAGTTCAACAACTTTTGCAAGA-CTT-TTTCAATGGCAAGGAGCTTTGCAAGA 103189 Query 552205 GTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 || ||||||||||||| || ||||| |||||||| ||| | || ||||| || | | | Sbjct 103190 GTATTAATCCAGATGAAGCAGTTGCGTATGGTGCAGCAGTACAGGCAGCAATCTTGACAG 103249 Query 552265 GACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCTCT 552322 || | | ||| || ||||| || | | || | ||||| || ||| | ||| Sbjct 103250 GAGATGCAAGTGAGAAG--ACAAAGGATCTCTTGCTACTTGATGTCACACCTTTGAGTCT 103307 Query 552323 TGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCC 552382 |||| | || || | || ||| | ||||| || | ||||| ||||||||||||||||| Sbjct 103308 TGGTATTGAGACTGCAGGCGGTGTAATGACCAAGTTAATCGAAAGAAATACTACTATTCC 103367 Query 552383 TTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCA 552442 | |||||| | ||||| |||| ||| |||| |||||| |||| ||||| ||||| Sbjct 103368 CACGAGAAAATCGCAAATATTTACTACCTATGCAGACAATCAACCTGCAGTTACTATTCA 103427 Query 552443 AATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTAC-TTTTAATT 552501 | | | |||||||||| | | || || || ||||| | |||| || ||| | | Sbjct 103428 AGTGTATGAAGGAGAACGTGCTATGACAAAGGACAATAA-CTTGTTGGGACGATTTGACT 103486 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 | ||| || || || || || |||||||| |||||||| ||||| || ||||| | Sbjct 103487 TGACAGGAATACCGCCAATGCCACGGGGAGTACCTCAAATTGAGGTTACGTTTGATATTG 103546 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCAACAAGAGTAAAAATA 552621 |||||||||| || |||||||| | ||| || || || ||| ||||| || || | Sbjct 103547 ATGCCAATGGTATCTTGAATGTCAGTGCAGTAGAGAAGAGTACCAATAAGAGCAATAAGA 103606 Query 552622 TTACT 552626 ||||| Sbjct 103607 TTACT 103611 Score = 183 bits (202), Expect = 2e-40 Identities = 378/558 (68%), Gaps = 6/558 (1%) Strand=Plus/Plus Query 549984 ACAAAGTA-GCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAA 550042 |||||| | ||| ||||||| || || ||||| || ||| |||||| || || ||| Sbjct 102109 ACAAAGAAAGCTGTAGGTATCGACTTGGGAACGACTTATTCTTGTGTGGGAGTATGGATG 102168 Query 550043 AATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTT 550102 |||| ||| ||||| ||| | || || || || |||||||| ||||| |||||||| Sbjct 102169 AATGAGCGAGTGGAAATCATTCCTAACGACCAGGGAAACAGAACCACTCCTTCTTATGTC 102228 Query 550103 TCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAAT 550162 |||||||||| || | | |||| || || ||||| |||||| | || ||| Sbjct 102229 GCTTTCACGGACGAGGAGCGACTGATTGGAGACGCTGCAAAGAATCAAGTCGCTCTTAAC 102288 Query 550163 CCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAG-AAGTTTTAATGATTCGAC 550221 || || ||| | ||||| || ||||| | ||||| | ||||||| |||||| | Sbjct 102289 CCACAGAACACTGTCTTTGACGCGAAACGCCTTATTGGTCGCAAGTTTTC-TGATTCCTC 102347 Query 550222 TGTTCAGGCAGATATGAAGCATTGGCCTTTCCAA---ATTGTTAATGTTTCTGGAAAACC 550278 || || ||||||||||| || ||||||||| || || | || | | || || Sbjct 102348 AGTGCAAGCAGATATGAAACACTGGCCTTTCAAAGTGATCGCGAAGGACGGAGATAAGCC 102407 Query 550279 TTATATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATC 550338 | ||| ||| | | | |||| || ||| | ||||| | ||||| | Sbjct 102408 CTTCATTCAAGTAAATTACAAAGGGGAGACGAAGACCTTTGCTCCAGAGGAGATTTCTGC 102467 Query 550339 TATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGA 550398 |||||| | || ||||| |||| ||| || | | | || | ||| || || Sbjct 102468 AATGGTTCTTCAAAAGATGAAGGAAACCGCCGAGGCATATCTGGGGGCAACAGTAACCGA 102527 Query 550399 TGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGC 550458 ||||| | || ||||| ||||| ||||||||||| || | || || || || ||||| Sbjct 102528 AGCAGTTGTCACAGTACCTGCATACTTTAATGACTCCCAGAGACAGGCAACCAAGGATGC 102587 Query 550459 TGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACT 550518 || ||||| || | || || ||||| || ||||||||||| ||||| || || | Sbjct 102588 GGGTGCGATTGCAGGCTTGAACGTACTTCGAATCATCAATGAACCCACTGCAGCAGCTAT 102647 Query 550519 TGCATATGGACTTGATAA 550536 |||||||||| | || || Sbjct 102648 TGCATATGGATTGGACAA 102665 >seq12 Length=221157 Score = 244 bits (270), Expect = 9e-59 Identities = 386/549 (70%), Gaps = 8/549 (1%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||||||||||||||| || || || ||| |||||||| || ||||||||| || || Sbjct 43260 TATAGGTATAGATTTGGGTACAACCTATTCCTGTGTTGGCGTCATGCAAAATGGCAAGGT 43319 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC--- 550110 || || ||||| || || ||||| |||| || || || || |||||||| || Sbjct 43320 GGAGATCATTGCAAACGAGTTGGGTAATAGAATAACCCCTTCCTACGTTTCTTTTACTCC 43379 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 ||| ||| || || || ||||| || || ||||||| || || || ||||| Sbjct 43380 GGAG---GAAAGATTGGTGGGGGATGCTGCTAAGAATCAAGCTCCTTTGAACCCAACCAA 43436 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 |||||||| ||||| ||| | || ||||| | | ||| | || | ||||| ||| Sbjct 43437 TACTATTTATGATGTGAAAAGATTTATTGGTCGCCGATTTGACGAACCAACTGTACAGAG 43496 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGC 550290 ||||| |||| | ||| | | ||||||| || |||||| ||||||||| ||| Sbjct 43497 AGATAGGAAGTTATTGCCATACGAAATTGTGAACAAGGATGGAAAGCCTTATATTCAAG- 43555 Query 550291 TACTCATGAA-GGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAA 550349 | || || ||| ||||||||| ||||||| |||| ||| ||||||| | Sbjct 43556 TGGAGATAAAAGGAGAGAAGAAACAATTTGCACCAGAGGAAATATCAGCTATGGTGCTTG 43615 Query 550350 TGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAA 550409 |||||||| | | || | || |||| | ||| | | | |||||| ||| Sbjct 43616 GTAAAATGAAGAAGATTGCTGAGGAGTTCCTTGGAAAGGAAATCAAAAACGCAGTAGTAA 43675 Query 550410 CTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTG 550469 |||| || |||||||||||||| | |||||||| || |||||||||||||| |||| Sbjct 43676 CTGTCCCGGCATATTTTAATGATGCTCAACGTCAGGCAACTAAAGATGCTGGTACTATTT 43735 Query 550470 CTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGAC 550529 | || | |||||| | || ||||||||||| || |||||||| || |||||||||| Sbjct 43736 CAGGCTTGAATGTTTTACGCATTATCAATGAGCCCACTGCTGCGGCTATTGCATATGGTT 43795 Query 550530 TTGATAAAC 550538 | ||||||| Sbjct 43796 TGGATAAAC 43804 Score = 233 bits (258), Expect = 2e-55 Identities = 387/554 (70%), Gaps = 6/554 (1%) Strand=Plus/Plus Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAA-CCAGTAGAACAAGTTTT 552082 ||||| || || | ||||||| |||||||| || ||||| || || ||| | ||| | Sbjct 44143 TTTGAGGAGCTTAATGCTGATCTATTTAGAAAGACT-TTGAAGCCTGTTGAAAAGGTTCT 44201 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 | ||| | | || | || || |||| | |||||||| || ||||| || ||||| Sbjct 44202 ACAAGACGCCGAAATGAAAAAGTCAGAAGTTGACGAAATTGTTCTAGTTGGAGGCTCTAC 44261 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGA 552202 | ||||| || | | ||| | |||| | ||||||||| ||| | || || | Sbjct 44262 TCGTATTCCAAAGGTACAGGAACTCTTAAAAGACTTTTTCAATGGGAAAGAGTTGCATAA 44321 Query 552203 AAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTC 552262 | | |||||||||| || ||||| || || ||||| || | |||| | |||||| || Sbjct 44322 GAATATTAATCCAGACGAAGCTGTCGCATACGGTGCTGCTGTGCAAGGCGGTATTCTCTC 44381 Query 552263 TGGACAAACTGATGAAAAACTACAAA--ATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 ||| || | |||| || ||||| |||| || ||| | || ||||||||| ||||| Sbjct 44382 AGGAGAAGGCGGTGAACAA--ACAAAGGATATGGTGCTTCTCGACGTTACTCCTTTATCT 44439 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 | ||| | ||||| ||||| || ||||||| || |||||| | ||||| || || Sbjct 44440 TTGGGTATCGAAACTGTTGGTGGAGTTATGACGAAGCTTATCAAACGAAATTCTGTGATC 44499 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 ||| || ||| | | |||| |||| ||| ||||| ||| | |||| ||| Sbjct 44500 CCTACAAAGAAAACACAAATATTCACTACATATCAGGATAACCAAGAAGTTGTTCTGATT 44559 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 ||| |||||||||| |||||| | || ||||||||| ||| || || | ||| | Sbjct 44560 CAAGTTTTTGAAGGTGAAAGAGCTATGACCAAAGATAATCATCTTCTGGGCAAGTTTGAG 44619 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 || |||| ||||| || |||||| | |||||||| || ||||||||||| || || || Sbjct 44620 TTGAAAGGGATTCCGCCAGCTCCTAGAGGAGTACCTCAGATTGAAGTTACCTTTGAAATA 44679 Query 552561 GATGCCAATGGAAT 552574 || | ||||| || Sbjct 44680 GACTCTAATGGCAT 44693 >seq36 Length=158315 Score = 196 bits (216), Expect = 4e-44 Identities = 410/605 (68%), Gaps = 31/605 (5%) Strand=Plus/Plus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAAT----TGAACCAGT 552070 ||||| ||||||||||| | ||||||||| ||| || | | | |||||| Sbjct 85947 AGGGCTAAATTTGAAGAATTGTGTTCTGAT----TTAATCAATCGTTGTCGTATACCAGT 86002 Query 552071 AGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGT 552130 ||| | ||||| |||| |||| | |||| | | ||| || ||||| |||| ||||| Sbjct 86003 AGAGACTGCTTTAAAAGATGCAAAAACTGATGCAACTAAAATAAATGAAGTTGTTCTTGT 86062 Query 552131 TGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATT-TCAATGGTA 552189 || || || ||||||||||| ||| || || |||| | | || |||| Sbjct 86063 CGGAGGTTCAACAAGAATTCCAGCTATTAAACAATTG----GTTCAAAATATCTTAGGTA 86118 Query 552190 AAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAG 552249 | | |||| | ||||||||||||||||| | ||| || ||||| || | || | Sbjct 86119 AGGTACCAAATCAGAGTGTTAATCCAGATGAAGTTGTGGCAATAGGTGCAGCTGTGCAGG 86178 Query 552250 CAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTA 552309 ||| | || | |||| |||| || || || | || | ||||||||| Sbjct 86179 CAGGTGTTTTAGCTGG---------TGAAG---TAAAAGATTTATTATTATTAGATGTTA 86226 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369 ||||||| ||| | || | ||||| | || ||| |||||||||| | || | | Sbjct 86227 CTCCTCTCTCTTTAGGAGTTGAAACTTTAGGTGGTGTTATGACTAAAATAATTCCACGTA 86286 Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTAC-GTATTCAGATAATCAAACT 552428 |||| || ||||| |||||||| | |||||||| | | | |||||||||| || Sbjct 86287 ATACAACAATTCCAACGAAAAAATCAGAAATTTTTTCTACAGCAAT-AGATAATCAACCT 86345 Query 552429 GCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT 552488 |||| |||||| |||| |||| |||||| || | | ||||||||||| || || Sbjct 86346 AATGTTGAAATTCATGTTTTACAAGGTGAAAGAGAACTAGCAAAAGATAATAA--AAGTT 86403 Query 552489 --GGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAG 552546 || |||||| ||||| || || | ||||| || | || || || |||||||||| Sbjct 86404 TAGGAACTTTTCGCTTAGATGGGATAGCACCTGCACCAAGAGGTGTGCCTCAAATTGAAG 86463 Query 552547 TTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAATCTAGCA 552606 |||| || ||||| ||||| ||||||||||| || || ||| |||||| | | | Sbjct 86464 TTACATTTGATATTGATGCTAATGGAATTTTATCCGTCACAGCTAAAGATAAAGCAACTA 86523 Query 552607 ACAAG 552611 ||||| Sbjct 86524 ACAAG 86528 Score = 145 bits (160), Expect = 6e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 550310 AAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCC 550369 ||||||||| | |||||| |||| ||| || || |||| ||| | | || Sbjct 85380 AAACAATTTGCCCCAGAAGAAATATCAGCTCAAGTGTTAAGAAAACTTGCTGAGGATGCT 85439 Query 550370 AGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAAT 550429 ||| | | | |||||| ||||||| | ||||| || || || ||||| ||||||||| Sbjct 85440 AGTCAATATTTGGGTCAAAAAGTTACTCAAGCAGTGATCACAGTTCCAGCTTATTTTAAT 85499 Query 550430 GACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGT 550489 || |||||||||||||| ||||||||||| || ||||| ||| | | ||||| ||| Sbjct 85500 GATTCACAACGTCAAGCAACTAAAGATGCAGGTAAGATTGCAGGATTAGAAGTTCTACGT 85559 Query 550490 ATTATCAATGAACCTACTGCTGCTGCACTTGCATATGG 550527 ||||| |||||||||||||||||| || | || ||||| Sbjct 85560 ATTATTAATGAACCTACTGCTGCTTCATTAGCCTATGG 85597 Score = 111 bits (122), Expect = 1e-18 Identities = 154/212 (73%), Gaps = 19/212 (9%) Strand=Plus/Minus Query 361626 AAACATCGAGTGTTCCTGCACCTAAATCATATATGATAATATTCCCCCCGTTT--TTATT 361683 ||||||| | ||||| ||||||||||| | | ||||||| |||| ||| | Sbjct 85662 AAACATCAAAGGTTCCACCACCTAAATCAAAGAC--TAATATT------GTTTCATTACT 85611 Query 361684 TTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTAT 361743 |||| || || || |||||| |||||||||||||| || ||||| ||||| || Sbjct 85610 TTTC------TTG--TCTAA-ACCATAGGCTAATGAAGCAGCAGTAGGTTCATTAATAAT 85560 Query 361744 TTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATC 361803 | ||| | | ||| || || || ||||||| ||| ||||||||||||| ||| Sbjct 85559 ACGTAGAACTTCTAATCCTGCAATCTTACCTGCATCTTTAGTTGCTTGACGTTGTGAATC 85500 Query 361804 ATTAAAATATGCAGGAACAGTAATCACTGCTT 361835 ||||||||| || ||||| || |||||||||| Sbjct 85499 ATTAAAATAAGCTGGAACTGTGATCACTGCTT 85468 Score = 111 bits (122), Expect = 1e-18 Identities = 141/194 (73%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 360877 ATTATGTTTAGTTAATTTTCTTTCGCCCTCAAATATTTTAATGCTAACAGTATCTTGATA 360936 ||||| ||| | || || |||||| || | || | | ||| |||| || ||||| Sbjct 86396 ATTATCTTTTGCTAGTTCTCTTTCACCTTGTAAAACATGAATTTCAACATTAGGTTGATT 86337 Query 360937 ATCAGTGTCTGTGGAAAATATTTTAGtttttttAGTAGGAATTACTGTATTTCTTGGTAT 360996 ||| | |||| ||||| |||| | |||||| || |||||| |||||| | ||| || Sbjct 86336 ATCTATTGCTGTAGAAAAAATTTCTGATTTTTTCGTTGGAATTGTTGTATTACGTGGAAT 86277 Query 360997 AATTGTAGTCATTTGGCGCTGTAAAGTTTCAACTCCTAACGATAAAGGAGTAATATCTAA 361056 ||| ||||||| | |||||||||||||||||| || | |||||||| |||||| Sbjct 86276 TATTTTAGTCATAACACCACCTAAAGTTTCAACTCCTAAAGAGAGAGGAGTAACATCTAA 86217 Query 361057 TAACACTAAATTTT 361070 ||| | ||||| || Sbjct 86216 TAATAATAAATCTT 86203 >seq51 Length=120017 Score = 136 bits (150), Expect = 3e-26 Identities = 277/406 (68%), Gaps = 14/406 (3%) Strand=Plus/Plus Query 552185 TGGTAAAAAATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGT-GCCGCAA 552243 ||||||| || || || |||| ||||||||||| | ||||| ||||| || || | Sbjct 87595 TGGTAAAGAACCAAGCAAAGGTGTCAATCCAGATGAAGTAGTTGC-TATGGGAGCAGCTA 87653 Query 552244 TTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAG 552303 |||||| || | | | |||| | || |||| | ||||| | ||| | Sbjct 87654 TTCAAGGAGGTGTATTACGTGGAGA---TG-TGAAGGAT------ATATTATTATTG--G 87701 Query 552304 ATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCG 552363 ||||||||||||| ||||| || | ||||| ||||||| || | ||| | || Sbjct 87702 ATGTTACTCCTCTTTCTCTAGGCATTGAAACTCTTGGAGGAGTTTTCACTCGATTGATTC 87761 Query 552364 ATAGAAATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATC 552423 |||||||| |||||||| ||||| || | || || || || | ||||||||| Sbjct 87762 CCAGAAATACCACTATTCCCACCAAAAAGTCACAAGTTTTCTCCACAGCTGCAGATAATC 87821 Query 552424 AAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATC 552483 |||| ||| ||| || || | |||| ||| || || | | ||||||||| Sbjct 87822 AAACGCAAGTTGGAATCAAAGTTCTCCAAGGTGAACGAGAAATGGCAGCAGATAATAAGT 87881 Query 552484 AACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTG 552543 ||| ||| ||| | || | ||||| || ||||| ||| | ||| | || ||||||| Sbjct 87882 TACTGGGTCAATTTGACTTGGTTGGTATACCCCCTGCGCCTAGAGGAATTCCTCAAATTG 87941 Query 552544 AAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 | |||||||| ||||||||||| ||||| ||| | |||| |||| Sbjct 87942 AGGTTACTTTTGATATCGATGCGAATGGTATTCTTCATGTATCTGC 87987 >seq54 Length=107229 Score = 129 bits (142), Expect = 5e-24 Identities = 164/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 563253 CCTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGT 563312 ||| | ||| || || | ||||| || ||||| |||||| || || | |||||| Sbjct 11250 CCTCAAACGCAGCACCAAGTGAAGAGTTGACTCTTTCTGAATATTATAGTCTGATAGAGT 11309 Query 563313 TCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCC 563372 | |||||||||||||| || ||||| || | | ||| || |||||||||||||| Sbjct 11310 ACGACCGTCTTCAAGTTGTTTACCAGCAAAGATTAAACGTTGTTGGTCAGGAGGAATTCC 11369 Query 563373 TTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGA 563431 |||||||||||| || ||| || || |||||| ||||||| | ||| ||| | Sbjct 11370 TTCTTTATCTTGTATCTTTGACTTGACGTTCTCAATAGTATCAGAAGGTTCTAC-TTCAA 11428 Query 563432 GAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 |||||| ||| || || ||||||||||| || || |||||||| Sbjct 11429 GAGTAATAGTCTTTCCTGTAAGAGTTTTCACAAAGATTTGCAT 11471 Score = 127 bits (140), Expect = 2e-23 Identities = 145/192 (76%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| |||||| || || | |||||| | |||||||||||||| || ||||| Sbjct 11053 TCTTTCTGAATATTATAGTCTGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAG 11112 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 || | | ||| || |||||||||||||||||||||||||| || ||| || || | Sbjct 11113 ATTAAACGTTGTTGGTCAGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACGTTC 11172 Query 563404 TCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAAC 563462 ||||| ||||||| | ||| ||| ||||||| ||| || || ||||||||||| || Sbjct 11173 TCAATAGTATCAGAAGGTTCTAC-TTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCAC 11231 Query 563463 GAAAATTTGCAT 563474 || |||||||| Sbjct 11232 AAAGATTTGCAT 11243 Score = 127 bits (140), Expect = 2e-23 Identities = 140/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| || || | |||||| | |||||||||||||| || ||||| || | | Sbjct 11517 AATATTATAGTCTGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAGATTAAACG 11576 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| || |||||||||||||||||||||||||| || ||| || || |||||| || Sbjct 11577 TTGTTGGTCAGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACATTCTCAATAGT 11636 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 ||||| | ||| ||| ||||||| ||| || || ||||||||||| || || |||| Sbjct 11637 ATCAGAAGGTTCTAC-TTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCACAAAGATTT 11695 Query 563471 GCAT 563474 |||| Sbjct 11696 GCAT 11699 Score = 122 bits (134), Expect = 7e-22 Identities = 139/184 (76%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 563292 AATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCT 563351 |||||| || || | |||||| | |||||||||||||| || ||||| || | | Sbjct 11745 AATATTATAGTCCGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAGATTAAACG 11804 Query 563352 TTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGT 563411 ||| || || ||||||||||||||||||||||| || ||| || || |||||| || Sbjct 11805 TTGTTGGTCGGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACGTTCTCAATAGT 11864 Query 563412 ATCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTT 563470 ||||| | ||| ||| ||||||| ||| || || ||||||||||| || || |||| Sbjct 11865 ATCAGAAGGTTCTAC-TTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCACAAAGATTT 11923 Query 563471 GCAT 563474 |||| Sbjct 11924 GCAT 11927 >seq6 Length=291449 Score = 123 bits (136), Expect = 2e-22 Identities = 137/183 (75%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||| ||||||| || |||||| ||||| | || |||||||||||||||||||| Sbjct 274500 ATATTATAATCAGAAAGCGTTCTTCCGTCTTCCAACTGCTTTCCGGCAAAAATAAGTCTC 274441 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 || ||||| |||||||| ||||||||||||||||| || ||| || || |||||| Sbjct 274440 TGTTGATCTGGAGGAATACCTTCTTTATCTTGAATCTTGGATTTCACATTTTCGATTGTA 274381 Query 563413 TCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGC 563472 |||| | | ||| | || | ||||| ||||| | ||||| || || |||||| Sbjct 274380 TCAGAAGGTTCAACTTCCAATGTTATGGTTTTTCCAGTCAACGTTTTCACAAATATTTGC 274321 Query 563473 ATA 563475 ||| Sbjct 274320 ATA 274318 Score = 109 bits (120), Expect = 4e-18 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 930657 GTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGT 930716 ||||| |||| |||||| || |||||||||||||||||||| | ||||| ||| | Sbjct 139628 GTATTGGTTGACTTTTCTAGTCCCAATATTGCCAAAGAAATGCACGTGGGACACTTGAGA 139687 Query 930717 TCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGTAAAGTTCAT 930776 || |||||||| || || | | ||||| || ||| |||| | || |||| Sbjct 139688 TCCACCATTATAGGCGACTGTCTATGTCGAGTATTGGAATTCTTAGGTCACCAAGTGTTA 139747 Query 930777 CGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTA 930829 || |||||||| | || || ||||||||||||||||| ||||| ||||| || Sbjct 139748 AGAATCAATCATGTGGGGGACTGGGGAACACAATTTGGAATGTTGATTGCATA 139800 >seq48 Length=131600 Score = 111 bits (122), Expect = 1e-18 Identities = 201/294 (68%), Gaps = 0/294 (0%) Strand=Plus/Minus Query 344249 AATGGGTTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATA 344308 |||| ||||||| | ||||| || ||||| ||||| ||||| || |||||||| |||| Sbjct 85922 AATGTATTTTATCGTCAACCATATGCTTGAGTCGTTGGTAATAAGTAGGACCAATAAATA 85863 Query 344309 TTTTAACTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTT 344368 | | |||||| | | || || | ||||| ||||| ||| ||| | | Sbjct 85862 TATGTGCTTCCAAAGGTCGACCTGTAAAACCATTGTACATCAGTTCCCATCCACGACTCT 85803 Query 344369 CATGTCCTAAAGCTACTAAATCATCATTAATTTTATTAATATTAACTCCTGTAAATGGAG 344428 || || || | | || | | | |||| || | | |||| | ||||| |||| Sbjct 85802 GATAACCCAATGTTTTCAACTGTTGAGATATTTCATCCACAGTAACCCAAGTAAAGGGAG 85743 Query 344429 TTGCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATT 344488 |||||||||| | | || ||| ||| ||||||| ||| | | ||| ||||| || | Sbjct 85742 TTGCATCTCCTTCTCTTCCAGCAATGGCAGAAACTTTTCCTTGAAGACACTCAATCAACT 85683 Query 344489 GACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAA 344542 ||||||| ||||| || | || ||| || ||||| |||||||| ||||||| Sbjct 85682 GACCTATTGTCATCCGACTTGGAATAGCATGTGGATTGATAATAATGTCAGGAA 85629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029273101007170