Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq36 484 2e-132 >seq36 Length=158315 Score = 484 bits (536), Expect = 2e-132 Identities = 711/997 (71%), Gaps = 8/997 (1%) Strand=Plus/Minus Query 25793 TGGGAGAGGTTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTTC 25852 ||||| | |||||| ||| |||| || || || || |||||||| | || ||||| Sbjct 27774 TGGGAACGTTTTTGTTCTTGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTT 27715 Query 25853 GGGGTGCTTATGATACCCTGC-TTACTCGCAGCCACTACATGT-TTTATACTTGCCTTCA 25910 || || | ||||| |||| | ||||| |||| || | ||| |||||| ||| || | Sbjct 27714 GGAGTATTAATGAT-CCCTACATTACTAACAGCTACATC-TGTATTTATAATTGGATTTA 27657 Query 25911 TCGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGT 25970 | || || || || || |||||||| || || | || |||||||| || || || | | Sbjct 27656 TAGCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATCATTGTTAT 27597 Query 25971 ACGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATT 26030 | ||||| ||||| ||| | || || | || || | ||||| ||||| ||| |||||| Sbjct 27596 ATGGAAATAATATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGGAATACATT 27537 Query 26031 TTTACCCGATCTGGGAAGCTGGCACACTGGACGAGTGGCTATACAATGGCGGACCATATC 26090 | || || || |||||||| | | | || || |||||||| |||||||| || ||| Sbjct 27536 TCTATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTATG 27477 Query 26091 AACTCATTATCTTCCACTTCTTAATAGGAGTAGCAGCATATGCAGGGAGACAGTGGGAAC 26150 || | || | || |||||||| || ||| | |||||| || | | |||||| Sbjct 27476 AATTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAAT 27417 Query 26151 TATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATCCG 26210 || || | || |||||| | || |||||| || || | |||| || | | | Sbjct 27416 TAAGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCTG 27357 Query 26211 CAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAATGC 26270 |||| || || || | | |||||| | |||||||| |||||| ||||| |||| Sbjct 27356 CAGCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATGC 27297 Query 26271 CTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATATAC 26330 | | ||||| |||||||||||||| |||||||| || |||||||| ||||||||||| Sbjct 27296 CATTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATTT 27237 Query 26331 TCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGCTG 26390 | ||||| || || |||||| ||||||||||| || || || || | | || || Sbjct 27236 TAATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGTG 27177 Query 26391 CTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGCAGAAACGACAGAGGA--AGTCTC 26448 | |||||||| | | || ||||| | || ||||| |||||| | ||||| Sbjct 27176 CAATGCACGGCTCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAATGAGTCTG 27117 Query 26449 ACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGTCGCTGCACA 26508 || || |||| ||||| ||||| ||||| | || || ||||| || || ||||| || Sbjct 27116 -CA-AACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCA 27059 Query 26509 CGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTTTAATAACAGCCGTTCTCTTCA 26568 || || ||||| ||||||||||| || ||||| || |||||||| || || | || Sbjct 27058 TGGTTATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACA 26999 Query 26569 TTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCTGACATCTATGGGTATCTGCAC 26628 |||||| | ||| ||||| || || | || ||||| |||||| | |||||| |||| Sbjct 26998 TTTCTTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCAC 26939 Query 26629 AATGGCATTTAACCTAAATGGTTTTAACTTTAACCAGTCAGTAGTAGATGTTAATGGAAA 26688 ||||||||||||| ||||||| ||||| ||||| || || || || ||| | | |||| Sbjct 26938 AATGGCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGAAG 26879 Query 26689 GATAATACCTACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCA 26748 |||| ||| ||||||||| | ||||| || || || | || | ||||| ||||| Sbjct 26878 AGTAATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCA 26819 Query 26749 CGAGCGTAATGCTCATAACTTTCCACTTGACTTAGCA 26785 || |||||||| ||||||||||| || || |||||| Sbjct 26818 TGAACGTAATGCACATAACTTTCCTCTAGATTTAGCA 26782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146725645551192