Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_016657.1 Length=47055 Score E Sequences producing significant alignments: (Bits) Value seq36 623 3e-174 >seq36 Length=158315 Score = 623 bits (690), Expect = 3e-174 Identities = 734/993 (74%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 35972 TGCTAGGTCAAGTGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTC 36031 ||||| || || || ||||| ||||| ||||| |||||||| ||||| || ||||| | Sbjct 26782 TGCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATT 26841 Query 36032 GGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGA 36091 ||||| || | ||| ||||||||||| | |||||||| | |||||||| || || Sbjct 26842 TGCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGA 26901 Query 36092 CTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAG 36151 ||||| || ||||| || || | ||||| ||||| ||| || || | || || || Sbjct 26902 TTGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAG 26961 Query 36152 CCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTGCGGCTATTATTAAA 36211 ||| || || || ||||| ||| | |||||||||||| ||| ||||||||| Sbjct 26962 CCAAATACATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAATTATTAAA 27021 Query 36212 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 36271 ||| ||||| ||||| || | ||| ||||| || |||||||| ||||| |||||||| || Sbjct 27022 GCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAGT 27081 Query 36272 CTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACG 36331 || | ||||||||| |||||||| |||| ||| ||| ||| | | ||||||||||| Sbjct 27082 TTCATATTCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCACG 27141 Query 36332 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 36391 || | ||||| |||||| |||||||| ||| ||||| | || || ||||| Sbjct 27142 TATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAATAC 27201 Query 36392 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGAC 36451 || |||||||| | |||||| ||||||||||| | ||||| ||||| || || || || Sbjct 27202 ACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAAAC 27261 Query 36452 AAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 36511 ||||||||||| ||||| || |||||||| | ||||||||||| || ||||| ||||| Sbjct 27262 TAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCTTG 27321 Query 36512 TCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTAC 36571 ||||| ||| |||| | |||||||| ||||| |||||||| ||||| ||||||| Sbjct 27322 TCCAATAGGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCTAC 27381 Query 36572 ACATATCCACGGCCTCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGC 36631 |||||| || | ||| || || | ||| || | |||||||| ||||||| || || Sbjct 27382 GGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATATGC 27441 Query 36632 TGAGATACCAATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACCA 36691 | || ||||| | ||||| || || || | || ||| || || || ||||||| ||| Sbjct 27442 ACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGCCA 27501 Query 36692 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTCGATGA 36751 || || | | ||| |||||||| || || ||||| || | || ||||| || |||| Sbjct 27502 TTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGATGT 27561 Query 36752 TGGGACGATTGCCCCAGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTC 36811 || || || || |||| || || || |||||||| | |||| |||||| || || || Sbjct 27562 AGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGTTC 27621 Query 36812 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCAC 36871 | |||||| |||||||| || || || ||||| | |||| |||||| |||| | | Sbjct 27622 TCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACAGATGT 27681 Query 36872 TGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTT 36931 ||||||| | || ||||||||||| ||| |||||||| || | ||||| || || | Sbjct 27682 AGCTGTTAGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGATTTTC 27741 Query 36932 TGTACTTGTAACCCAGTCACATAAACTTTCCCA 36964 ||| || |||| ||| ||| |||| |||||| Sbjct 27742 TGTGCTAGTAATCCAAGAACAAAAACGTTCCCA 27774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150453626382282