Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq36 563 3e-156 >seq36 Length=158315 Score = 563 bits (624), Expect = 3e-156 Identities = 710/975 (73%), Gaps = 0/975 (0%) Strand=Plus/Plus Query 5194 TGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTT 5253 ||||| ||| || || ||||| || ||||| ||||| ||||||||||| || || | || Sbjct 26782 TGCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATT 26841 Query 5254 GGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGA 5313 ||||| || | | ||| |||||||| || | ||| || ||| ||||| || || Sbjct 26842 TGCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGA 26901 Query 5314 CTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAG 5373 ||||| || ||||| || || | ||||| ||||| ||| ||| || | ||| || || Sbjct 26902 TTGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAG 26961 Query 5374 CCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAA 5433 ||| || || || || ||||| ||| | |||||||||||| || ||| ||||| Sbjct 26962 CCAAATACATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAATTATTAAA 27021 Query 5434 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 5493 ||| ||||| ||||| || | ||| ||||| || |||||||| ||||| |||||||| || Sbjct 27022 GCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAGT 27081 Query 5494 TTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACG 5553 ||| | |||||||| |||||||| |||| ||| ||| | | | ||||||||||| Sbjct 27082 TTCATATTCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCACG 27141 Query 5554 AATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATAC 5613 || | ||||| |||||| || ||||| ||| || || | || || ||||| Sbjct 27142 TATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAATAC 27201 Query 5614 CCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATAC 5673 ||||||||||| | ||| || ||||||||||| | ||||| ||||| || ||||| || Sbjct 27202 ACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAAAC 27261 Query 5674 GAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTG 5733 |||||||| |||||||||||||| ||||| | ||||||||||| ||||| || || Sbjct 27262 TAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCTTG 27321 Query 5734 TCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTAC 5793 ||| | ||| || | | |||||| | |||||| ||||| || ||||| | ||||| Sbjct 27322 TCCAATAGGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCTAC 27381 Query 5794 GCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTAAGC 5853 | ||||| || |||||||| | | || || | |||||||| ||||||| || || Sbjct 27382 GGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATATGC 27441 Query 5854 TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAGCCA 5913 || ||||||| |||||| || || | | || || || || ||||| || ||||| Sbjct 27442 ACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGCCA 27501 Query 5914 TTCATCGAGATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGGAGCT 5973 |||||| | | ||||||||||| || |||||||| |||| || ||||| || || | Sbjct 27502 TTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGATGT 27561 Query 5974 GGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGGGTTC 6033 ||||||| || || | ||| || || |||||||| | | ||||||| || ||||| Sbjct 27562 AGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGTTC 27621 Query 6034 ACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCAGTAGT 6093 | || ||||| || || ||||| || ||||||| ||| | | ||||||| ||| || Sbjct 27622 TCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACAGATGT 27681 Query 6094 TGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGGTTGTT 6153 || |||| | || || |||||||| || |||||||| || | ||||| || || | Sbjct 27682 AGCTGTTAGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGATTTTC 27741 Query 6154 GGTGCTAGTAACCCA 6168 |||||||||| ||| Sbjct 27742 TGTGCTAGTAATCCA 27756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152648815094838