Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_016659.1 Length=47536 Score E Sequences producing significant alignments: (Bits) Value seq36 619 4e-173 >seq36 Length=158315 Score = 619 bits (686), Expect = 4e-173 Identities = 733/993 (74%), Gaps = 0/993 (0%) Strand=Plus/Plus Query 25452 TGCTAAGTCAAGAGGGAAGTTGTGTGCGTTACGCTCATGCATAACTTCCATGCCTAAGTC 25511 |||||| || ||||| ||||| ||||| ||||| |||||||| ||||| || ||||| | Sbjct 26782 TGCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATT 26841 Query 25512 GGCACGGTTAAGAATGTCAGCCCAAGTTGGGACGACTCTTCCGTTGGAATCAACGACTGA 25571 ||||| || | ||| ||||||||||| | |||||||| | |||||||| || || Sbjct 26842 TGCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGA 26901 Query 25572 CTGATTGAAGTTAAAGCCGTTGAGATTAAAAGCCATAGTGGAGACTCCCATAGCGGTAAG 25631 ||||| || ||||| || || | ||||| ||||| ||| || || | || || || Sbjct 26902 TTGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAG 26961 Query 25632 CCATATGCAAGTGACGGGCCAAGCAGCCAGGAAGAAATGTAAACTACGGCTATTATTAAA 25691 ||| || || || ||||| ||| | |||||||||||| || ||||||||| Sbjct 26962 CCAAATACATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAATTATTAAA 27021 Query 25692 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 25751 ||| ||||| ||||| || | ||| ||||| || |||||||| ||||| |||||||| || Sbjct 27022 GCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAGT 27081 Query 25752 CTCTTCTTCTTGGCCGAATTTATATCCATAGTTCTGAGATTCAAGCCCAGTTGTTTCACG 25811 || | ||||||||| |||||||| |||| ||| ||| ||| | | ||||||||||| Sbjct 27082 TTCATATTCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCACG 27141 Query 25812 AATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATAC 25871 || | ||||| |||||| |||||||| ||| ||||| | || || ||||| Sbjct 27142 TATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAATAC 27201 Query 25872 CCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCTGCCTGAAAGAC 25931 || |||||||| | |||||| ||||||||||| | ||||| ||||| || || || || Sbjct 27202 ACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAAAC 27261 Query 25932 AAACATAAAATTGAAAGTCCCTGAAATACCAAGAGGCATACCATCAGAGAAACTCCCTTG 25991 ||||||||||| ||||| || |||||||| | ||||||||||| || ||||| ||||| Sbjct 27262 TAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCTTG 27321 Query 25992 TCCAAAAGGGTAGACTAAGAATACAGCAAATGCTGCTGCAACAGGGGCTGAATAAGCTAC 26051 ||||| ||| |||| | |||||||| ||||| |||||||| ||||| ||||||| Sbjct 27322 TCCAATAGGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCTAC 27381 Query 26052 ACATATCCACGGCCTCATGCCTAGTCTATAACTAAGTTCCCATTGTCGTCCCAAGTAAGC 26111 |||||| || | ||| || || | ||| || | |||||||| ||||||| || || Sbjct 27382 GGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATATGC 27441 Query 26112 TGAGATGCCGATGAGAAAGTGGAACACAATAAGTTGATATGGTCCACCGTTATACAACCA 26171 | || || || | ||||| || || || | || ||| || || || ||||| | ||| Sbjct 27442 ACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGCCA 27501 Query 26172 CTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATGA 26231 || || | | ||| |||||||| || || ||||| || | || ||||| ||||||| Sbjct 27502 TTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGATGT 27561 Query 26232 CGGGACGATTGCCCCTGAGATGATGTTGTTTCCATAGAGTAATGCTCCTGAGACAGGCTC 26291 || || || || || | || || || |||||||| | |||| |||||| || || || Sbjct 27562 AGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGTTC 27621 Query 26292 ACGAATACCATCTATATCCACGGGAGGCGCAGCAACAAATGCAATTAAAAATGCTGTCAC 26351 | |||||| |||||||| || || || ||||| | |||| |||||| |||| | | Sbjct 27622 TCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACAGATGT 27681 Query 26352 TGCTGTTAAAAGTGCAGGGATCATTAGTACCCCAAACCACCCCACATAGAGGCGGTTGTT 26411 ||||||| | || ||||||||||| ||| |||||||| || | ||||| || || | Sbjct 27682 AGCTGTTAGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGATTTTC 27741 Query 26412 TGTACTTGTAACCCAGTCACATAAACTTTCCCA 26444 ||| || |||| ||| ||| |||| |||||| Sbjct 27742 TGTGCTAGTAATCCAAGAACAAAAACGTTCCCA 27774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151992818467908