Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq18 111 4e-19 >seq18 Length=202930 Score = 111 bits (122), Expect = 4e-19 Identities = 280/420 (67%), Gaps = 12/420 (3%) Strand=Plus/Minus Query 150359 ATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGCGTTAGTTGGTGAACCAGGTGTT 150418 || ||||||||||| | | ||| || || ||| || | ||||| ||||| ||| Sbjct 139475 ATCCAGATTCTTTCCAGGAGAACGAAGAATAATCCAATCCTACTAGGTGAGCCAGGAGTT 139416 Query 150419 GGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCG-CTAATGGTGATGTTCCAGA 150477 ||||||||| || | || ||| |||||||||| || | || | || ||||||||| Sbjct 139415 GGTAAAACAGCCATAGCAGAAGGACTAGCACAACGAATTGTCTCA-GGAGATGTTCCAAG 139357 Query 150478 TTCTATGAAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAA 150537 ||| |||| || | | | | | || || || |||| | | ||| || | || Sbjct 139356 TTCCTTGAAGAATCGTCGATTAATAGCATTAGATTTGAGTGCCATCATTGCCGGAGCAAA 139297 Query 150538 GTATCGTGGTGAATTCGAAGAACGTGTAGA--CAATTTGCTACAAGAACTAAAAGAACGC 150595 |||||| || ||||||||||||||| || | || ||| || | ||| ||| ||| Sbjct 139296 GTATCGAGGAGAATTCGAAGAACGTCTAAAAGCAGTTT--TAAAGGAAGTAACTGAAGCT 139239 Query 150596 GATGATG---TTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACT 150652 || | || ||||| |||| || || ||||| || || || |||||||||| || Sbjct 139238 GAAGGTGGAATTATTTTGTTTATTGACGAAATTCACACGGTTGTGGGTGCTGGAAGAAC- 139180 Query 150653 GGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATT 150712 | ||| | |||| | ||||| | ||||| || | | |||||| | Sbjct 139179 --GGATGGTGCGATGGACGCTGGAAATATTCTCAAACCGATGCTTGCAAGAGGTGAATTG 139122 Query 150713 CGTGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGCA 150772 ||| || ||||||||||| | || |||||||| ||| | ||||| |||||| ||| Sbjct 139121 CGTTGTATTGGTGCAACAACTTTGGAAGAATATCGAAAATATATTGAGTTAGATGCTGCA 139062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147584033383634