Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq36 511 5e-140 >seq36 Length=158315 Score = 511 bits (566), Expect = 5e-140 Identities = 685/953 (72%), Gaps = 0/953 (0%) Strand=Plus/Minus Query 162523 GACAATCGCATCTATGTCGGTTGGTTCGGTGTCTTGATGATCCCTTGCTTGCTCGCAGCA 162582 || ||||| |||| | |||||||| || || || ||||||||| || || |||| Sbjct 27741 GAAAATCGTCTCTACATAGGTTGGTTTGGAGTATTAATGATCCCTACATTACTAACAGCT 27682 Query 162583 GCAACTTGCTTCATCATTGCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGA 162642 || || || || |||| ||| || || || || ||||||||||| || ||||| ||| Sbjct 27681 ACATCTGTATTTATAATTGGATTTATAGCTGCTCCACCAGTTGATATAGACGGTATTAGA 27622 Query 162643 GAACCTGTTGCAGGTTCACTTCTCTATGGTAACAACATCATCTCTGGTGCTGTCGTTCCT 162702 ||||| ||| |||| ||| | | ||||| || || || || |||||||| | || ||| Sbjct 27621 GAACCAGTTTCAGGATCATTGTTATATGGAAATAATATTATAACTGGTGCTATTGTACCT 27562 Query 162703 AGTTCAAATGCTATTGGTCTTCACTTCTATCCTATCTGGGAAGCAGCAACTCTTGATGAG 162762 | || ||||| || || | || ||||||||||| |||||||||||| || | ||||| Sbjct 27561 ACATCTAATGCAATAGGAATACATTTCTATCCTATTTGGGAAGCAGCATCTTTAGATGAA 27502 Query 162763 TGGTTGTATAATGGTGGACCTTTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACA 162822 ||| | |||||||| || |||| || | |||| || |||||| |||| ||||| Sbjct 27501 TGGCTATATAATGGCGGTCCTTATGAATTAATAGTTTTGCACTTCTTTATTGGAATTTGT 27442 Query 162823 GCATACTGTGGTCGTCAGTGGGAACTTTCTTACCGCTTAGGTATGCGTCCTTGGATCTGT 162882 ||||| || ||| | |||||| | || || | || |||||||||||||| Sbjct 27441 GCATATATGGGACGTGAATGGGAATTAAGCTATCGTCTTGGAATGCGTCCTTGGATAGCC 27382 Query 162883 GTTGCATACTCTGCACCAGTATCTGCAGCATTCGCTGTGTTCTTGGTCTATCCTTTCGGT 162942 || || | ||| || || || ||||||| ||||| || | |||||||| | || Sbjct 27381 GTAGCTTTCTCAGCTCCTGTTGCTGCAGCCACAGCTGTATTTATTATCTATCCTATTGGA 27322 Query 162943 CAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATGTTC 163002 |||||| ||| || || | ||||| | |||||||||||||||||||| | ||||| Sbjct 27321 CAAGGTAGTTTTTCAGATGGTATGCCATTAGGTATTTCTGGTACTTTTAATTTTATGTTA 27262 Query 163003 GTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCAGGT 163062 || |||||||| || || || || ||||||| || || |||||||| || || || ||| Sbjct 27261 GTTTTCCAAGCTGAACATAATATTTTAATGCATCCGTTTCATATGATGGGTGTTGCTGGT 27202 Query 163063 GTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTTATC 163122 ||||| || |||||| | |||||||| |||||||| |||||||| ||||| | | || Sbjct 27201 GTATTTGGAGGTTCATTATTTAGTGCAATGCACGGCTCTCTTGTAACTTCAAGTTTGATA 27142 Query 163123 AGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAG 163182 | ||||| || ||| | ||||| ||| | |||||||| || || |||||| | || Sbjct 27141 CGTGAAACAACAGAGAATGAGTCTGCAAACAATGGTTATAAATTTGGCCAAGAATATGAA 27082 Query 163183 ACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGCATCT 163242 ||||| ||||| |||||||||||||| || ||||| | || || ||||| |||||| Sbjct 27081 ACTTATAACATCGTTGCTGCTCATGGTTATTTTGGAAGATTAATTTTCCAATATGCAAGC 27022 Query 163243 TTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGG 163302 || || || ||||| ||| | || |||||| | ||| || || || || || || ||| Sbjct 27021 TTTAATAATTCACGCTCATTACATTTCTTCTTAGCTTTATGGCCAGTAGTATGTATTTGG 26962 Query 163303 TTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAA 163362 |||| | | ||| | || |||||||| ||| | || || || || || || ||| Sbjct 26961 CTCACATCTTTAGGTATCAGCACAATGGCATTTAACTTAAATGGATTTAATTTTAATCAA 26902 Query 163363 TCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCA 163422 || || ||||| | || | ||| ||| ||||||||| ||||| | || | ||| Sbjct 26901 TCTGTTGTTGATTCTCAAGGAAGAGTAATTAATACTTGGGCTGATATTTTAAATCGTGCA 26842 Query 163423 GGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGA 163475 | || || ||||| ||||| || |||||||| || ||||| || || || Sbjct 26841 AATTTAGGAATAGAAGTAATGCATGAACGTAATGCACATAACTTTCCTCTAGA 26789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553081806428520