Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11 239 3e-57 seq12 233 1e-55 seq36 210 1e-48 seq51 156 3e-32 seq54 136 3e-26 seq9 136 3e-26 seq6 116 2e-20 seq63 111 1e-18 >seq11 Length=227306 Score = 239 bits (264), Expect = 3e-57 Identities = 658/992 (66%), Gaps = 20/992 (2%) Strand=Plus/Plus Query 475358 GTAAGAGCAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTA 475417 |||| ||||| ||||||||| | || | || || |||||||||||||| || || || Sbjct 102760 GTAAAGGCAACTGCTGGAGATACTCACTTGGGAGGAGAAGATTTTGATAACAGGCTGGT- 102818 Query 475418 TCATGGTGTGTTGAA-GATTTCAAGAGGAAAAATAAAGTTGATCTTTCAAC--ATCTGCT 475474 | | | || || || ||||| | ||| |||| ||| | || | ||| | Sbjct 102819 TGACTATCTGGCAAAAGAGTTCAAACGAAAATATAACAAGGATATCACATCCAATCACCG 102878 Query 475475 AAAGCATTAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCT 475534 || | ||| | ||| | || |||||||| | ||||| || | || || ||| Sbjct 102879 C--GCTATGAGAAGGCTTCGTACAGCTTGTGAGAGAGCTAAAAGAACCCTCTCAAGTGCA 102936 Query 475535 ACTCAAACTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATT 475594 || ||||| ||| ||||||| |||||||| | ||||| ||||| | | | || |||| Sbjct 102937 ACCCAAACAACTATTGAAGTGGATTCTCTCTACGAAGGCATTGACTTTTACACCAGTATT 102996 Query 475595 ACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTT 475654 || || || || |||||||| | ||| ||| | || | || || || ||||| Sbjct 102997 ACGAGAGCCAAGTTTGAAGACTTGTGTATGGATTTGTTCCGCAAGTGCATAGATCCCGTC 103056 Query 475655 GAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTA 475714 || |||| | | || ||| | | ||| ||| | ||||| ||||| | ||| Sbjct 103057 GAGAGAGTTATTAAGGACTCTGGATTATCCAAGAGTCAAATTCATGATGTTGTTTTGGTA 103116 Query 475715 GGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAA 475773 |||||||| || ||||||||||| | | || | || || | |||| ||||| || Sbjct 103117 GGAGGTTCGACTCGAATTCCAAAAGTTCAACAACTT-TTGCAAGACTTTTTCAATGGCAA 103175 Query 475774 AAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAA 475831 || | || ||| ||| ||||| |||||||| ||||| ||||| || || || || Sbjct 103176 GGAGCTT--TGCAAGAGTATTAATCCAGATGAAGCAGTTGCGTATGGTGCAGCAGTACAG 103233 Query 475832 GCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTA 475891 ||||| || || |||| | || ||||| ||| || | | || |||| || Sbjct 103234 GCAGCAATCTTGACAGGAGATGCAAGTGAGAAGACAAAGGATCTCTTGCTACTTGATGTC 103293 Query 475892 ACTCCACTTTCATTA--GGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACA 475949 || || ||| | | ||| |||| || | || || | ||||| || | || || | Sbjct 103294 ACACC--TTTGAGTCTTGGTATTGAGACTGCAGGCGGTGTAATGACCAAGTTAATCGAAA 103351 Query 475950 GAAATACTCCTAT-CCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAA 476008 |||||||| |||| |||| | | |||||| || ||||| | || ||| | || |||||| Sbjct 103352 GAAATACTACTATTCCCACG-AGAAAATCGCAAATATTTACTACCTATGCAGACAATCAA 103410 Query 476009 ACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAA 476068 | | || || || ||| | | |||||| ||| | | || || || |||||| Sbjct 103411 CCTGCAGTTACTATTCAAGTGTATGAAGGAGAACGTGCTATGACAAAGGACAATAACTTG 103470 Query 476069 CTTGGAACTTTTAATCTTGA-AGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGA 476127 | ||| ||| | ||||| ||| || || || || | ||||| ||||||||||| Sbjct 103471 TTGGGACGATTTGA-CTTGACAGGAATACCGCCAATGCCACGGGGAGTACCTCAAATTGA 103529 Query 476128 AGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAG 476187 ||||| |||||||||||||| |||||||| | ||||| | ||| || || || Sbjct 103530 GGTTACGTTTGATATTGATGCCAATGGTATCTTGAATGTCAGTGCAGTAGAGAAGAGTAC 103589 Query 476188 TAACAAGAGTAAAAATATAACTATTACAAACAATCGTGGTAGATTTACTGAAGAACAAAT 476247 || ||||| || || || ||||||||||| | || | || | |||| |||| Sbjct 103590 CAATAAGAGCAATAAGATTACTATTACAAATGAAAAAGGACGTTTATCGCAAGAGGAAAT 103649 Query 476248 TCAACGTATGGTTGATGAAGCCAAAGAGTTTGAAGAAGCTGATAACAAGAGAAAAGCTGC 476307 | ||||||||||| | ||||| || ||| | | | ||| | ||| |||| | Sbjct 103650 TGAACGTATGGTTAAGGAAGCGGAACAGTACAAGGCGGAAGATGAGAAGCAGAAAGTTCG 103709 Query 476308 TATTGATGCAAAGAATGAACTTGAAAATTATG 476339 || || || |||||| |||||| | |||| Sbjct 103710 CATCGAAGCGAAGAATAGTCTTGAACAATATG 103741 >seq12 Length=221157 Score = 233 bits (258), Expect = 1e-55 Identities = 398/569 (70%), Gaps = 6/569 (1%) Strand=Plus/Plus Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCC-GTTGAACAAGTTCT 475665 ||||| || || | ||||||| |||||||| || ||||| || |||||| | ||||| Sbjct 44143 TTTGAGGAGCTTAATGCTGATCTATTTAGAAAGACT-TTGAAGCCTGTTGAAAAGGTTCT 44201 Query 475666 CAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 ||| | || | | || ||| |||| | ||||||||||| || ||||| || || Sbjct 44202 ACAAGACGCCGAAATGAAAAAGTCAGAAGTTGACGAAATTGTTCTAGTTGGAGGCTCTAC 44261 Query 475726 AAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTT-AATGGTAAAAAGTTAAATG 475784 | |||||||| || ||| | ||| | | |||| ||||| ||| |||| || Sbjct 44262 TCGTATTCCAAAGGTACAGGAACT-CTTAAAAGACTTTTTCAATGGGAAAGAGTTGCATA 44320 Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 | | | | ||||| || |||||||| ||||| || |||||||| |||| | |||| | | Sbjct 44321 AGAATATTAATCCAGACGAAGCTGTCGCATACGGTGCTGCTGTGCAAGGCGGTATTCTCT 44380 Query 475845 CAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCAT 475904 |||| || | || || ||| |||| || ||| | ||||| ||||| | || | Sbjct 44381 CAGGAGAAGGCGGTGAACAAACAAAGGATATGGTGCTTCTCGACGTTACTCCTTTATCTT 44440 Query 475905 TAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCC 475964 | ||| | ||||| ||||| || ||||||| || ||||| | ||||| || |||| Sbjct 44441 TGGGTATCGAAACTGTTGGTGGAGTTATGACGAAGCTTATCAAACGAAATTCTGTGATCC 44500 Query 475965 CATGCAAA-AAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 | | |||| ||| || || |||| | || ||| ||||| ||| | ||| || Sbjct 44501 C-TACAAAGAAAACACAAATATTCACTACATATCAGGATAACCAAGAAGTTGTTCTGATT 44559 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 ||| | ||||||||||||||| | || ||||||||| | || || | ||| | Sbjct 44560 CAAGTTTTTGAAGGTGAAAGAGCTATGACCAAAGATAATCATCTTCTGGGCAAGTTTGAG 44619 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 | |||| ||||| || ||||| |||||||| ||||| ||||||||||| ||||| || Sbjct 44620 TTGAAAGGGATTCCGCCAGCTCCTAGAGGAGTACCTCAGATTGAAGTTACCTTTGAAATA 44679 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGC 476172 || | ||||| || |||| |||| |||| Sbjct 44680 GACTCTAATGGCATACTTAGTGTTTCTGC 44708 Score = 210 bits (232), Expect = 1e-48 Identities = 384/558 (69%), Gaps = 16/558 (3%) Strand=Plus/Plus Query 474324 GAATTGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATG 474383 ||| || || ||||| ||||| || || || || ||||| | || |||||||| Sbjct 43253 GAACTGTTATAGGTATAGATTTGGGTACAACCTATTCCTGTGTTGGCGTCATGCAAAATG 43312 Query 474384 GTAAAGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTT 474443 | || || || || ||||| || || |||||||||| ||| || || || ||||||| Sbjct 43313 GCAAGGTGGAGATCATTGCAAACGAGTTGGGTAATAGAATAACCCCTTCCTACGTTTCTT 43372 Query 474444 TTACTGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTG 474503 ||||| ||| | | || ||||||||||| |||||||| | | || || Sbjct 43373 TTACTCCGGAGGAAAGATTGGTGGGGGATGCTGCTAAGAATCAAGCTCCTTTGAACCCAA 43432 Query 474504 TTAATACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCC 474563 |||||||||| ||||| |||||||| |||||||| ||||| || | ||||| | Sbjct 43433 CCAATACTATTTATGATGTGAAAAGATTTATTGGTCGCCGATTTGACGAACCAACTGTAC 43492 Query 474564 AATCTGATATGC-GTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATA 474622 | |||| | || |||| | | || || | || | ||| || || ||||| Sbjct 43493 AGAGAGATAGGAAGTTATTGCCATACGAAATTG-TGAACAAGGATGGAAAGCCTTATATT 43551 Query 474623 GAAGCA---ATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATG 474679 ||| ||| | ||| || | ||||||||| |||| || |||| || | ||| Sbjct 43552 CAAGTGGAGATAAA---AGGAGAGAAGAAACAATTTGCACCAGAGGAAATATCAGCTATG 43608 Query 474680 GTTTTAGCCAAAATGAAACAAACCGC----GAGCTCATATCTTGGACAAGAAGTAACTGA 474735 || | | |||||||| | | || ||| || |||||| | ||| | | | Sbjct 43609 GTGCTTGGTAAAATGAAGAAGATTGCTGAGGAGTTC----CTTGGAAAGGAAATCAAAAA 43664 Query 474736 TGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGC 474795 |||||| | ||||| || ||||||||||||||| |||||||||| |||||||||||||| Sbjct 43665 CGCAGTAGTAACTGTCCCGGCATATTTTAATGATGCTCAACGTCAGGCAACTAAAGATGC 43724 Query 474796 GGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACT 474855 || | ||| |||| | ||||||||||| ||||| ||||| || || || || || | Sbjct 43725 TGGTACTATTTCAGGCTTGAATGTTTTACGCATTATCAATGAGCCCACTGCTGCGGCTAT 43784 Query 474856 TGCTTATGGTCTTGATAA 474873 ||| |||||| | ||||| Sbjct 43785 TGCATATGGTTTGGATAA 43802 Score = 86.0 bits (94), Expect = 4e-11 Identities = 132/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Minus Query 290798 TTTTTAT-TTGTCCAAGTTTTGCTTCCAAGACCATATGTTAATGAAGCTGCTGTTGGTTC 290856 ||||| | || |||| |||| ||||| |||||||| | | || || || || || Sbjct 43820 TTTTTCTCTTTTCCACGTTTA---TCCAA-ACCATATGCAATAGCCGCAGCAGTGGGCTC 43765 Query 290857 ATTTATAATTCTTAATACAT-CAAGACCTGCAATTTTTGCCGAATCTAAAGTTGCCTGGC 290915 ||| ||||| | ||| |||| |||| |||| ||| | | | |||| ||||||||| | Sbjct 43764 ATTGATAATGCGTAAAACATTCAAG-CCTGAAATAGTACCAGCATCTTTAGTTGCCTGAC 43706 Query 290916 GTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTTTTTCCACTTTCTTTTTCA 290975 |||| |||||||||||||| || ||||| || | || || |||| | |||| ||| || Sbjct 43705 GTTGAGCATCATTAAAATATGCCGGGACAGTTACTACTGCGTTTTTGA-TTTCCTTTCCA 43647 Query 290976 A 290976 | Sbjct 43646 A 43646 >seq36 Length=158315 Score = 210 bits (232), Expect = 1e-48 Identities = 424/627 (68%), Gaps = 23/627 (4%) Strand=Plus/Plus Query 475593 TTACAAGGGCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAAT----TGAA 475648 |||| ||||||||||||||||| | ||||||||| ||| || | | | | Sbjct 85942 TTACCAGGGCTAAATTTGAAGAATTGTGTTCTGAT----TTAATCAATCGTTGTCGTATA 85997 Query 475649 CCCGTTGAACAAGTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTT 475708 || || || | | | | |||| | ||| ||| | | || | ||||| ||||| Sbjct 85998 CCAGTAGAGACTGCTTTAAAAGATGCAAAAACTGATGCAACTAAAATAAATGAAGTTGTT 86057 Query 475709 CTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAAT 475768 ||||| ||||||||||||||||||||| || | | || || || || |||| ||| Sbjct 86058 CTTGTCGGAGGTTCAACAAGAATTCCAGCTATTAAACAATTGGTT-CAAAATATCTTA-- 86114 Query 475769 GGTAAAAAGTTAAATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTC 475828 ||||| |||| | ||||| ||||| ||||||| ||| ||| || || ||||| Sbjct 86115 GGTAAGGTACCAAATCAGAGTGTTAATCCAGATGAAGTTGTGGCAATAGGTGCAGCTGTG 86174 Query 475829 CAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGAC 475888 || |||| | ||||| | ||| || | | || || |||| | | || Sbjct 86175 CAGGCAGGTGTTTTAGCTGGTGAAGTAAAAGATT-------TATTATTAT-----TAGAT 86222 Query 475889 GTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGAC 475948 || ||||| || || ||||| ||||||| | || || |||||||||| | ||| Sbjct 86223 GTTACTCCTCTCTCTTTAGGAGTTGAAACTTTAGGTGGTGTTATGACTAAAATAATTCCA 86282 Query 475949 AGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAA 476008 | ||||| | || ||| ||||||||| || | ||||| || ||||||||| Sbjct 86283 CGTAATACAACAATTCCAACGAAAAAATCAGAAATTTTTTCTACAGCAATAGATAATCAA 86342 Query 476009 ACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAA 476068 | | ||| || || | || ||||||||||| || | | ||||||||||| | Sbjct 86343 CCTAATGTTGAAATTCATGTTTTACAAGGTGAAAGAGAACTAGCAAAAGATAATAAAAGT 86402 Query 476069 CTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAA 476128 | ||||||||| | || || || | ||||| || ||||| || |||||||||||| Sbjct 86403 TTAGGAACTTTTCGCTTAGATGGGATAGCACCTGCACCAAGAGGTGTGCCTCAAATTGAA 86462 Query 476129 GTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATCTAGT 476188 ||||| |||||||||||||| ||||| ||| | || || ||| |||||| | | | Sbjct 86463 GTTACATTTGATATTGATGCTAATGGAATTTTATCCGTCACAGCTAAAGATAAAGCAACT 86522 Query 476189 AACAAGAGTAAAAATATAACTATTACA 476215 |||||| || ||| ||||||||| Sbjct 86523 AACAAGGAACAATCTATTACTATTACA 86549 Score = 149 bits (164), Expect = 4e-30 Identities = 132/165 (80%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 474712 ATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTC 474771 |||| | || ||| |||| ||| | ||||| || || |||||||| |||||||||||||| Sbjct 85445 ATATTTGGGTCAAAAAGTTACTCAAGCAGTGATCACAGTTCCAGCTTATTTTAATGATTC 85504 Query 474772 TCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTAT 474831 ||||||||||||||||||||||| || | |||||||| | | ||| |||||||||| Sbjct 85505 ACAACGTCAAGCAACTAAAGATGCAGGTAAGATTGCAGGATTAGAAGTTCTACGTATTAT 85564 Query 474832 TAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 ||||||||| || || || || | || |||||| | || ||||| Sbjct 85565 TAATGAACCTACTGCTGCTTCATTAGCCTATGGTTTAGACAAGAA 85609 Score = 102 bits (112), Expect = 5e-16 Identities = 101/131 (77%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 290827 ACCATATGTTAATGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGC 290886 |||||| | ||||||||| || || |||||||| ||||| | || || || | ||||| Sbjct 85598 ACCATAGGCTAATGAAGCAGCAGTAGGTTCATTAATAATACGTAGAACTTCTAATCCTGC 85539 Query 290887 AATTTTTGCCGAATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGT 290946 ||| || | | |||| |||||| || ||||| | ||||||||||||||| || ||||| Sbjct 85538 AATCTTACCTGCATCTTTAGTTGCTTGACGTTGTGAATCATTAAAATAAGCTGGAACTGT 85479 Query 290947 AATAACAGCTT 290957 || || |||| Sbjct 85478 GATCACTGCTT 85468 >seq51 Length=120017 Score = 156 bits (172), Expect = 3e-32 Identities = 271/389 (70%), Gaps = 14/389 (4%) Strand=Plus/Plus Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGG-AGCTGCTGTCCAAGCAGCTATTTTA 475843 || |||| ||||| ||||||| ||||| ||||| ||| ||| | |||| || | | ||| Sbjct 87612 AAGGTGTCAATCCAGATGAAGTAGTTGC-TATGGGAGCAGCTATTCAAGGAGGTGTATTA 87670 Query 475844 TCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCA 475903 || ||| | ||| ||| |||| | ||| || || ||||| ||||| Sbjct 87671 CGTGG------AGATGTGAAGG---ATA-TATTATTATTG--GATGTTACTCCTCTTTCT 87718 Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATC 475963 |||| ||||||| ||||||| || | ||| | ||| ||||||||| |||| Sbjct 87719 CTAGGCATTGAAACTCTTGGAGGAGTTTTCACTCGATTGATTCCCAGAAATACCACTATT 87778 Query 475964 CCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 || |||||| ||| |||| || ||||| | | ||||||||||| || ||| Sbjct 87779 CCCACCAAAAAGTCACAAGTTTTCTCCACAGCTGCAGATAATCAAACGCAAGTTGGAATC 87838 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 || | | |||||||| || || | | ||||||||| ||| || ||| | Sbjct 87839 AAAGTTCTCCAAGGTGAACGAGAAATGGCAGCAGATAATAAGTTACTGGGTCAATTTGAC 87898 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 | | ||||| || ||||| || |||||| ||||||||||||| |||||||||||||| Sbjct 87899 TTGGTTGGTATACCCCCTGCGCCTAGAGGAATTCCTCAAATTGAGGTTACTTTTGATATC 87958 Query 476144 GATGCAAATGGTATTCTTAATGTTACTGC 476172 ||||| |||||||||||| |||| |||| Sbjct 87959 GATGCGAATGGTATTCTTCATGTATCTGC 87987 >seq54 Length=107229 Score = 136 bits (150), Expect = 3e-26 Identities = 138/180 (77%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || |||||| || | |||||| | ||||||||||| || |||||||| || | ||| Sbjct 11517 AATATTATAGTCTGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAGATTAAACG 11576 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 |||||| ||||||||||||||||| || ||||| |||||| |||||| |||||||| Sbjct 11577 TTGTTGGTCAGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACATTCTCAATAGT 11636 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || |||||| |||||||| || || || ||||| || || || ||||| Sbjct 11637 ATCAGAAGGTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCACAAAGATTTG 11696 Score = 132 bits (146), Expect = 3e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 480582 TCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAA 480641 ||||| || |||||| || | |||||| | ||||||||||| || |||||||| Sbjct 11053 TCTTTCTGAATATTATAGTCTGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAG 11112 Query 480642 ATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCT 480701 || | ||||||||| ||||||||||||||||| || ||||| |||||| ||||| Sbjct 11113 ATTAAACGTTGTTGGTCAGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACGTTC 11172 Query 480702 TCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACG 480761 ||||||||||||| || |||||| |||||||| || || || ||||| || || Sbjct 11173 TCAATAGTATCAGAAGGTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCACA 11232 Query 480762 AAAATTTG 480769 || ||||| Sbjct 11233 AAGATTTG 11240 Score = 132 bits (146), Expect = 3e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 480582 TCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAA 480641 ||||| || |||||| || | |||||| | ||||||||||| || |||||||| Sbjct 11281 TCTTTCTGAATATTATAGTCTGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAG 11340 Query 480642 ATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCT 480701 || | ||||||||| ||||||||||||||||| || ||||| |||||| ||||| Sbjct 11341 ATTAAACGTTGTTGGTCAGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACGTTC 11400 Query 480702 TCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACG 480761 ||||||||||||| || |||||| |||||||| || || || ||||| || || Sbjct 11401 TCAATAGTATCAGAAGGTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCACA 11460 Query 480762 AAAATTTG 480769 || ||||| Sbjct 11461 AAGATTTG 11468 Score = 127 bits (140), Expect = 1e-23 Identities = 136/180 (76%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 480590 AACATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACG 480649 || |||||| || | |||||| | ||||||||||| || |||||||| || | ||| Sbjct 11745 AATATTATAGTCCGATAGAGTACGACCGTCTTCAAGTTGTTTACCAGCAAAGATTAAACG 11804 Query 480650 TTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGT 480709 |||||| || |||||||||||||| || ||||| |||||| ||||| |||||||| Sbjct 11805 TTGTTGGTCGGGAGGAATTCCTTCTTTATCTTGTATCTTTGACTTGACGTTCTCAATAGT 11864 Query 480710 ATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || |||||| |||||||| || || || ||||| || || || ||||| Sbjct 11865 ATCAGAAGGTTCTACTTCAAGAGTAATAGTCTTTCCTGTAAGAGTTTTCACAAAGATTTG 11924 >seq9 Length=249065 Score = 136 bits (150), Expect = 3e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||| ||| ||||| || ||| || || | | ||| | | |||||| | Sbjct 144158 CAAG-TGAAGGGTAGACTCTTTTTGAATATTGTAGTCTGACAAAGTACGGCCATCTTCCA 144100 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 || || ||||||||||| | ||||||||| || || ||||| |||||||||||||||| Sbjct 144099 ACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAA 144040 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 |||| ||||| |||||||||||| | | || | |||||| |||||||| || | Sbjct 144039 TCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTAATAGTCTTCC 143980 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||||||||| || || ||||| Sbjct 143979 CAGTGAGAGTCTTCACAAATATTTG 143955 Score = 136 bits (150), Expect = 3e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||| ||| ||||| || |||||| || | | ||| | |||||| | Sbjct 144386 CAAG-TGAAGGGTAGACTCTTTTTGAATATTATAGTCTGACAAAGTACGACCATCTTCCA 144328 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 || || ||||||||||| | ||||||||| || || ||||| |||||||||||||||| Sbjct 144327 ACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGAA 144268 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 |||| ||||| |||||||||||| | | || | |||||| |||||||| || | Sbjct 144267 TCTTAGACTTGACGTTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTAATAGTCTTCC 144208 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||||||||| || || ||||| Sbjct 144207 CAGTGAGAGTCTTCACAAATATTTG 144183 Score = 136 bits (150), Expect = 3e-26 Identities = 154/205 (75%), Gaps = 1/205 (0%) Strand=Plus/Minus Query 480565 CAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTTATCTTCAA 480624 |||| ||||| ||| ||||| || |||||| || | | ||| | |||||| | Sbjct 144614 CAAG-TGAAGGGTAGACTCTTTTTGAATATTATAGTCTGACAAAGTACGACCATCTTCCA 144556 Query 480625 GTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAA 480684 || || ||||||||||| | ||||||||| || || ||||| |||||||||||||||| Sbjct 144555 ACTGTTTACCAGCAAAAATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTGTCTTGAA 144496 Query 480685 TCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTAC 480744 |||| |||||| |||||||||||| | | || | |||||| |||||||| || | Sbjct 144495 TCTTGGACTTGACATTTTCAATAGTATCTGAGGGTTCAACTTCAAGAGTAATAGTCTTCC 144436 Query 480745 CGGTGAGAGTCTTAACGAAAATTTG 480769 | ||||||||||| || || || || Sbjct 144435 CAGTGAGAGTCTTCACAAATATCTG 144411 Score = 104 bits (114), Expect = 2e-16 Identities = 149/206 (72%), Gaps = 8/206 (4%) Strand=Plus/Minus Query 867575 GATGACCAGGAAGAGG---TTCAGGAACGGGAGCATTTTTTCCAATATTAATAATAATAT 867631 ||||||||| | ||| ||| ||||| ||||||| || ||||||||| || |||||| Sbjct 240509 GATGACCAGCGATAGGACATTCTGGAACAGGAGCATCTTCTCCAATATTGATGGTAATAT 240450 Query 867632 CTTCAGGATAAATTCtttttttGACATGTCC--TGATTTAGGATTACAACCTCTTCCTAA 867689 ||||||| |||| ||| || || | || ||| ||||| ||||||||| || Sbjct 240449 CTTCAGGCATTATTCGTTTCTTTACTTTGCCCATGAG--AGGATGTTCACCTCTTCCCAA 240392 Query 867690 AAATATACCTGGTGGTTCAATTCTAAAATTACCTACAGGTTGTTCTTTGCCATCAACAAG 867749 ||| | ||||| || || | |||||| || ||||| | |||||||||||| |||| Sbjct 240391 AAAGAGTCCTGGAGGCTCTACTCTAAAGTTTCCTACTTTCTCTTCTTTGCCATCGACAAT 240332 Query 867750 TGCAAATTTATA-TTTTTCTTCTTCT 867774 || | | |||| || ||| ||||| Sbjct 240331 GGCCACTGTATACTTCTTCACCTTCT 240306 >seq6 Length=291449 Score = 116 bits (128), Expect = 2e-20 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 817100 GATTTTTCATCTCCAAATATTGCAAAGGAAATGCATATTGGACACTTGAGATCTACAATA 817159 || ||||| ||| |||||||| || |||||||| | |||||||||||||| || || Sbjct 139637 GACTTTTCTAGTCCCAATATTGCCAAAGAAATGCACGTGGGACACTTGAGATCCACCATT 139696 Query 817160 ATTGGTGAATCTCTTTGTAGAATATATGAATTTTGTGGATGTGAAGTACAAAGAATAAAT 817219 || || || | ||| ||| || ||| ||||| | || |||| |||||| ||| Sbjct 139697 ATAGGCGACTGTCTATGTCGAGTATTGGAATTCTTAGGTCACCAAGTGTTAAGAATCAAT 139756 Query 817220 CATATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCATA 817263 ||| | || || ||||||||||||||||| ||||| |||||||| Sbjct 139757 CATGTGGGGGACTGGGGAACACAATTTGGAATGTTGATTGCATA 139800 Score = 107 bits (118), Expect = 1e-17 Identities = 130/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||||||||||| || ||||| ||||| | |||||||| ||||||||||| | || Sbjct 274498 ATTATAATCAGAAAGCGTTCTTCCGTCTTCCAACTGCTTTCCGGCAAAAATAAGTCTCTG 274439 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||| |||||||| ||||| || ||||||||||| ||| ||| ||| || ||||| Sbjct 274438 TTGATCTGGAGGAATACCTTCTTTATCTTGAATCTTGGATTTCACATTTTCGATTGTATC 274379 Query 480713 AGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || | ||| | || || ||||| || || | || || || || ||||| Sbjct 274378 AGAAGGTTCAACTTCCAATGTTATGGTTTTTCCAGTCAACGTTTTCACAAATATTTG 274322 >seq63 Length=104598 Score = 111 bits (122), Expect = 1e-18 Identities = 125/165 (76%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 480593 ATTATAATCAGCTAGAGTTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTG 480652 ||||||||||| | |||||| |||||| |||||||| || ||||| || | |||||| Sbjct 60716 ATTATAATCAGACAAAGTTCTTCCATCTTCTAGTTGCTTGCCTGCAAATATCAAACGTTG 60657 Query 480653 TTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATC 480712 |||||| ||||| || |||||||||||||| ||||| || || |||||||||||| Sbjct 60656 TTGATCCGGAGGGATACCTTCCTTGTCTTGTATCTTGGACTTTACGTTTTCAATAGTATC 60597 Query 480713 AG-TGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGAGTCT 480756 | | | || || ||| ||||| || || || || || |||| Sbjct 60596 GGAAGGCTCAACTTCCAA-AGTAATGGTCTTCCCAGTAAGTGTCT 60553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268160626529084