Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020835.1 Length=47325 Score E Sequences producing significant alignments: (Bits) Value seq36 565 7e-157 >seq36 Length=158315 Score = 565 bits (626), Expect = 7e-157 Identities = 749/1033 (73%), Gaps = 16/1033 (2%) Strand=Plus/Plus Query 17835 GCTAAATCTAGCGGGAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCAAGGTTA 17894 ||||||||||| || |||||||| |||||||| || ||||| ||||| | || | || Sbjct 26783 GCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATTT 26842 Query 17895 GCTCTGTTGAGTACGTCAGCCCATGTAGGTACGACTTGTCCTCCAGCTGCTACAATGGAT 17954 || | || | | |||||||| ||| | ||| |||| || | |||| ||| Sbjct 26843 GCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGAT 26902 Query 17955 TGGTTGAAGTTGAATCCATTGAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGC 18014 || || || || |||||||| | ||||| ||||| ||| ||| || | ||| || ||| Sbjct 26903 TGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAGC 26962 Query 18015 CATATGCAAGTGACGGGCCAAGCAGCCAAGAAGAAATGTA--GACTCCTGCTATTGTTAA 18072 || || || || ||||| ||| ||||||||||||| || | || ||| |||| Sbjct 26963 CAAATACATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAG-CGTGA-ATTATTAA 27020 Query 18073 AGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATATTATACG 18132 |||| ||||| ||||| || | ||| ||||| || |||||||| ||||| || ||||| | Sbjct 27021 AGCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAG 27080 Query 18133 TCTCTTCTTCTTGGCCAAATTTATATCCATAGTTCTGAGACTCAAGCTCAGTCGTTTCTC 18192 | || | |||||||||||||||||| |||| ||| ||||||| ||| || ||||| | Sbjct 27081 TTTCATATTCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCAC 27140 Query 18193 TAATAAGTGAGGAAGTAACAAGACTTCCGTGCATAGCAGCGAATAAAGCTCCACCGAATA 18252 || | ||||| |||||| |||||||| ||| ||||| | || || |||| Sbjct 27141 GTATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAATA 27200 Query 18253 CCCCTGCAACACCGAGCATATGGAACGGATGCATAAGGATATTGTGTTCGGCTTGGAATA 18312 | || |||||||| | |||||| ||||||||||| | ||||| ||||| |||||||| | Sbjct 27201 CACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAAA 27260 Query 18313 CGAACATGAAATTGAAAGTACCGCTAATACCAAGAGGCATACCATCAGAGAAACTCCCTT 18372 | ||||| ||||| |||||||| |||||| | ||||||||||| || ||||| |||| Sbjct 27261 CTAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCTT 27320 Query 18373 GTCCAAAAGGATAAACGAGAAATACTGAGAAGGCAGCTGCTACTGGTGCGGAATAAGCAA 18432 |||||| |||||| | | |||||| | ||| || || || || || || |||| | Sbjct 27321 GTCCAATAGGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCTA 27380 Query 18433 CACAAATCCACGGGCGCATACCTAGTCTATAACTAAGTTCCCATTGTCGTCCCATGTAAG 18492 | ||||| || ||||| || || | ||| || | |||||||| |||||||| || | Sbjct 27381 CGGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATATG 27440 Query 18493 CTGCGATGCCGATGAGAAAGTGGAACACAATGAGTTGATATGGTCCTCCGTTATATAACC 18552 | || || || | ||||| || || || | || ||| || || || ||||||| || Sbjct 27441 CACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGCC 27500 Query 18553 ACTCGTCGAGGGTTGCAGCTTCCCAGATTGGGTAGAAGTGAAGACCGATTGCGTTAGATG 18612 | || || | | ||| |||||||| || || ||||| || | || ||||| ||||||| Sbjct 27501 ATTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGATG 27560 Query 18613 ACGGGACGATTGCCCCTGATATGATGTTGTTTCCATAGAGTAAGGCTCCTGAGACAGGCT 18672 || || || || || | ||| || || |||||||| | || | |||||| || || | Sbjct 27561 TAGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGTT 27620 Query 18673 CACGAATACCATCTATGTCAACGGGAGGAGCAGCAACAAATGCAATCAAAAAT---GCTG 18729 | | |||||| ||||| ||||| || |||||||| | |||| |||| | |||| | || Sbjct 27621 CTCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACAGATG 27680 Query 18730 TAGCTGCGGTTAAAAGTGCAGGGATCATAAGTACCCCAAACCACCCCACGTAGAGGCGGT 18789 ||||| |||| | || ||||||||| | ||| |||||||| || | |||||| || | Sbjct 27681 TAGCT---GTTAGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGAT 27737 Query 18790 TGTTTGTACTCGTAACCCAGTCACATAAACTTTCCCA----GTTGCTATTTG--GTCTTG 18843 | | ||| || |||| ||| ||| |||| |||||| ||||| |||| ||||| Sbjct 27738 TTTCTGTGCTAGTAATCCAAGAACAAAAACGTTCCCATAAGCTTGCTGTTTGACGTCTTT 27797 Query 18844 TTAGTGTGGCTGT 18856 || ||| ||||| Sbjct 27798 CTAATGTAGCTGT 27810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151317621939702