Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020855.1 Length=192497 Score E Sequences producing significant alignments: (Bits) Value seq36 563 1e-155 >seq36 Length=158315 Score = 563 bits (624), Expect = 1e-155 Identities = 717/981 (73%), Gaps = 12/981 (1%) Strand=Plus/Plus Query 7890 TGCTAAGTCTAATGGGAAGTTGTGTGCATTTCTTTCATGCATAACTTCCATACCTAAGTT 7949 |||||| |||| || ||||| |||||||| | ||||||||| ||||| || ||||| || Sbjct 26782 TGCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATT 26841 Query 7950 TGCTCTGTTTAATACGTCACCCCATGTAGGAATGATTTTACCATTAACATCAACAACTGA 8009 ||| | ||||| | ||| |||| ||| ||| | | | || | | ||||||||| || Sbjct 26842 TGCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGA 26901 Query 8010 TTGGTTAAAGTTAAATCCGTTAAGGTTAAATGCCATTGTGCAAATACCCATAGAAGTTAA 8069 ||| ||||| |||||||| || | ||||||||||||||||| ||||| | ||| || | Sbjct 26902 TTGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAG 26961 Query 8070 CCAAACACATACAACTGGGAATGTAGCGAGGAAGAAGTGAA--GA-CTTCTACTGTTGTT 8126 ||||| |||||| ||||| || ||| | |||||| || | || | | | || || Sbjct 26962 CCAAATACATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAA---TTATT 27018 Query 8127 AAACGATGCATACTGGAAGATTAATCTACCAAAGTATCCATGAGCAGCAACAATATTATA 8186 ||| |||||| ||||| |||||||| ||||| || |||||||||||||| || ||||| Sbjct 27019 AAAGCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATA 27078 Query 8187 GGTCTCTTCTTCTTGACCAAACTTATAACCATAGTTCTGAGACTCTTCTTCAGTTGTCTC 8246 || || | |||||| ||||| |||||||||| ||| |||||| | || ||||| || Sbjct 27079 AGTTTCATATTCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTC 27138 Query 8247 TCTGATTAGAGAAGATGTAACTAAAGAACCGTGCATAGCACTGAAGAGTGATCCACCGAA 8306 | || | | || || || | ||| |||||||| ||||| || | ||| || || || Sbjct 27139 ACGTATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAA 27198 Query 8307 CATACCTGCTACCCCTGCCATATGGAAAGGATGCATAAGAATGTTATGCTCTGCTTGGAA 8366 | ||| || || || |||||| || |||||||| | ||| ||||| || |||||||| Sbjct 27199 TACACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAA 27258 Query 8367 TACGAACATGAAGTTAAACGTACCAGAAATACCTAGAGGCATTCCATCAGAGAATGAACC 8426 || ||||| || ||||| |||||||||||||||| ||||| ||||| || || ||| Sbjct 27259 AACTAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACC 27318 Query 8427 CTGACCAAATGGAT--ATACTAAGAACA-CTGCGAAAGCAGCAGATACTGGAGCACTATA 8483 || |||| |||| ||| ||| ||| ||| | || |||| || ||||| | Sbjct 27319 TTGTCCAATAGGATAGATAATAAATACAGCTGTG---GCTGCAGCAACAGGAGCTGAGAA 27375 Query 8484 TGCTACACAGATCCATGGTCTCATACCTAAGCGGTATGATAACTCCCACTGTCTACCCAT 8543 ||||| ||||| || | ||| || | || || ||| ||||| | | ||||| Sbjct 27376 AGCTACGGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCAT 27435 Query 8544 GTAAGCAGAAATTCCAATAAGGAAGTGGAAGATAACCAACTGATATGGACCTCCGTTATA 8603 || ||| |||||||||||| |||||| || | | || | ||| ||||| || ||||| Sbjct 27436 ATATGCACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATA 27495 Query 8604 CAACCACTCATCTAATGTGGCAGCTTCCCAAATGGGATAGAAGTGTAATCCAATAGCGTT 8663 | ||| |||||||| | || ||||||||||| |||||||| |||| ||| || || || Sbjct 27496 TAGCCATTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATT 27555 Query 8664 GGAAGATGGAACGACAGCACCAGAGATGATGTTGTTTCCATACATGAATGAACCTGCAAC 8723 || | || || | |||||||| || || || |||||||| | ||||| |||| ||| Sbjct 27556 AGATGTAGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAAC 27615 Query 8724 AGGTTCACGAATACCGTCGATATCGACAGGTGGAGCAGCAATAAATGCCACGATAAAGCA 8783 ||||| | ||||||||| ||||| || ||||||||||| |||||| | | ||||| Sbjct 27616 TGGTTCTCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATAC 27675 Query 8784 AGTAGCAGCAGCTAACAAGCAAGGAATCATTAGAACTCCAAACCAACCGACATAAAGTCT 8843 || | ||| | || || ||| ||||||| |||||||||||||| | || || | Sbjct 27676 AGATGTAGCTGTTAGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACG 27735 Query 8844 GTTGTTTGTACTTGTAACCCA 8864 || | ||| || |||| ||| Sbjct 27736 ATTTTCTGTGCTAGTAATCCA 27756 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 615859066644760