Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020865.1 Length=45730 Score E Sequences producing significant alignments: (Bits) Value seq36 430 4e-116 >seq36 Length=158315 Score = 430 bits (476), Expect = 4e-116 Identities = 687/986 (70%), Gaps = 0/986 (0%) Strand=Plus/Minus Query 41225 TGGGAGCAGTTTTGTTCCTGGGTCACCTCTACTAATAACCGTCTTTATGTAGGATGGTTC 41284 ||||| | |||||||| ||| | || || | || ||||| || |||| ||||| Sbjct 27774 TGGGAACGTTTTTGTTCTTGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTT 27715 Query 41285 GGAGTCCTTATGATTCCGTGCCTCCTTGCCGCTACAACTTGTTTTATTATCGCCTTTGTT 41344 ||||| | ||||| || | || | |||||| || ||||| || | ||| | Sbjct 27714 GGAGTATTAATGATCCCTACATTACTAACAGCTACATCTGTATTTATAATTGGATTTATA 27655 Query 41345 GGCGCACCACCTGTTGACATCGATGGAATCCGAGAACCCGTCGCTGGCTCCCTGTTGTAT 41404 | || ||||| ||||| || || || || ||||||| || | || || |||| ||| Sbjct 27654 GCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATCATTGTTATAT 27595 Query 41405 GGTAACAACATCATATCAGGAGCCGTCGTTCCGAGCAGTAATGCCATCGGACTACACTTC 41464 || || || || ||| | || || | || || | |||||| || ||| |||| ||| Sbjct 27594 GGAAATAATATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGGAATACATTTC 27535 Query 41465 TACCCAATTTGGGAAGCTGCTACACTTGATGAATGGCTGTACAACGGCGGTCCATTCCAA 41524 || || ||||||||||| || | | ||||||||||| || || |||||||| | || Sbjct 27534 TATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTATGAA 27475 Query 41525 CTCACCGTATTCCACTTCCTCATTGGCGTCTTTGCTTACATGGGACGAGAGTGGGAACTT 41584 | | || || |||||| | ||||| | | ||| || |||||||| || |||||| | Sbjct 27474 TTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAATTA 27415 Query 41585 AGCTATCGACTAGGGATGAGGCCCTGGATCTTTGTTGCGTACTCTGCTCCTGTCGCCGCT 41644 |||||||| || || ||| | || ||||| || || | ||| |||||||| || || Sbjct 27414 AGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCTGCA 27355 Query 41645 GCGACTGCTGTGTTCCTTGTTTATCCGTTTGGACAGGGCTCTTTTTCTGATGCTATGCCC 41704 || || ||||| || || | ||||| ||||||| || |||||| |||| |||||| Sbjct 27354 GCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATGCCA 27295 Query 41705 TTGGGGATATCCGGCACCTTCAACTACATGCTGGTGTTCCAGGCTGAGCACAATATTCTT 41764 || || || || || || || || | ||| | || ||||| ||||| || |||||| | Sbjct 27294 TTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATTTTA 27235 Query 41765 ATGCATCCTTTTCACATGCTGGGTGTGGCCGGCGTATTTGGTGGGAGTTTGTTCTCTGCT 41824 |||||||| ||||| ||| ||||||| || || |||||||| || || || ||| Sbjct 27234 ATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGTGCA 27175 Query 41825 ATGCACGGTAGCCTGGTCACGTCGTCACTCATTCGTGAGACGACTGAAGAGGTTTCACAG 41884 |||||||| || || || || | || ||||| || || || | | || Sbjct 27174 ATGCACGGCTCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAATGAGTCTGCA 27115 Query 41885 AACTATGGTTACAAGTTTGGTCAAGAGGAAGAGACTTACAATATTGTTGCTGCTCACGGC 41944 ||| ||||||| || ||||| ||||| | || ||||| || || ||||||||||| || Sbjct 27114 AACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCATGGT 27055 Query 41945 TATTTTGGTCGGCTTATCTTCCAATATGCTAGCTTTAATAATTCCCGTAGTCTTCATTTC 42004 |||||||| | | || ||||||||||| |||||||||||||| || | |||||| Sbjct 27054 TATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACATTTC 26995 Query 42005 TTTCTTGCTGCCTGGCCTGTTGTAGGTATTTGGTTTGCTGCGCTTGGCGTGTCTACCATG 42064 || | ||| ||||| || ||| |||||||| | | | | || | || ||| Sbjct 26994 TTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCACAATG 26935 Query 42065 GCTTTCAACTTGAATGGTTTCAACTTTAACCAATCTCTGCTAGCTGCTGATGGACAGGTG 42124 || || ||||| ||||| || || ||||| |||||| | | | | || | ||| || Sbjct 26934 GCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGAAGAGTA 26875 Query 42125 ATCAACACCTGGGCTGACATTCTTAACCGTGCCAACCTTGGCTTTGAGGTGATGCATGAG 42184 || || || |||||||| ||| | || ||||| || | || | || || |||||||| Sbjct 26874 ATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCATGAA 26815 Query 42185 CGGAACGCACACAACTTCCCGCTTGA 42210 || || ||||| ||||| || || || Sbjct 26814 CGTAATGCACATAACTTTCCTCTAGA 26789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 146213648183832