Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020874.1 Length=46198 Score E Sequences producing significant alignments: (Bits) Value seq36 484 2e-132 >seq36 Length=158315 Score = 484 bits (536), Expect = 2e-132 Identities = 711/997 (71%), Gaps = 8/997 (1%) Strand=Plus/Plus Query 25876 TGCTAAGTCAAGTGGAAAGTTATGAGCATTACGCTCGTGCATAACTTCAAAGCCGAGGTT 25935 |||||| || || ||||||||||| |||||||| || ||||| ||||| | || | || Sbjct 26782 TGCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATT 26841 Query 25936 AGCTCGGTTTAATACATCAGCCCATGTAGGTATTATCTTTCCATTAACATCTACTACTGA 25995 || || ||||| | ||||||||| ||| |||| |||| | | ||| || || || Sbjct 26842 TGCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGA 26901 Query 25996 CTGGTTAAAGTTAAAACCATTTAGGTTAAATGCCATTGTGCAGATACCCATAGATGTCAG 26055 || ||||| ||||| ||||||| ||||||||||||||||| |||||| | |||||| || Sbjct 26902 TTGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAG 26961 Query 26056 CCATATGCCAACAACCGGCCAAGTAGCAAGAAAGAAATGAAGAGAACGGCTGTTATTAAA 26115 ||| || | || || ||||| ||| | |||||||| | || || |||||||| Sbjct 26962 CCAAATACATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAATTATTAAA 27021 Query 26116 ACTCGCATACTGAAAAATTAATCTCCCAAAGTACCCGTGTGCAGCGACAATATTATATGT 26175 || ||||| || ||||||||||| ||||| || || || ||||| || || ||||| || Sbjct 27022 GCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAGT 27081 Query 26176 CTCTTCATCTTGCCCAAACTTATAGCCATAATTCTGTGAGACT--TCCTCTGTCGTTTCT 26233 || | ||||| ||||| ||||| |||| || || ||||| | |||||| ||||| Sbjct 27082 TTCATATTCTTGGCCAAATTTATAACCATTGTT-TG-CAGACTCATTCTCTGTTGTTTCA 27139 Query 26234 GCAATAAGTGAGGAAGTAACCAAACTTCCGTGCATAGCAGCGAAAAGAGCTCCACCGAAA 26293 || | ||||| || | | |||||||| ||| || | | || || || Sbjct 27140 CGTATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAAT 27199 Query 26294 ACCCCAGCAACACCAGCCATATGGAATGGGTGCATGAGTATATTATGTTCTGCTTGGAAT 26353 || ||||||||||| |||||| || || ||||| | ||||||||||| |||||||| Sbjct 27200 ACACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAA 27259 Query 26354 ACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATTCCATCACTAAAACTCCCT 26413 || |||||||| |||||||||||||| ||||| | ||||| ||||| |||||| ||| Sbjct 27260 ACTAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCT 27319 Query 26414 TGTCCGAAAGGATAAACTAAGAACACTGCGAGAGCTGCGGATAGTGGTGCTGTATATGCA 26473 ||||| | |||||| | | || || || ||||| | | || |||| | || Sbjct 27320 TGTCCAATAGGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCT 27379 Query 26474 ACAAATATCCATGGTCTCATTCCTAGTCTGTAAGATAGTTCCCACTGTCTCCCTGCATAT 26533 || |||||| || | |||||| || | || || |||||| | | || |||| Sbjct 27380 ACGGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATAT 27439 Query 26534 GCTGCTACTCCTATTAAGAAGTGGAAGATAATGAGTTGATATGGTCCGCCATTGTATAGC 26593 || | ||| || |||||||| || | || | || ||| || |||||||| |||||| Sbjct 27440 GCACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGC 27499 Query 26594 CACTCGTCCAGTGTGCCAGCTTCCCAGATCGGGTAAAAATGTAGTCCGATTGCGTTAGAG 26653 || || || | | | |||||||| || || || ||||||| ||| ||||| ||||| Sbjct 27500 CATTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGAT 27559 Query 26654 GAGGGGACGACTGCTCCTGATATTATATTGTTTCCGTACATTAACGAGCCGGAAACTGGC 26713 | || || | || || | ||| ||||| ||||| || | || || || |||||||| Sbjct 27560 GTAGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGT 27619 Query 26714 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATGAAGGCAAGTATAAA-ACATGT 26772 || | || || |||||||| || || || || || || || ||| |||||| ||| | Sbjct 27620 TCTCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACA-GA 27678 Query 26773 AGTGGCTGCGAGTAA-GCAGGGTATCATAAGCACCCCGAACCATCCCACATAGAGACGGT 26831 || |||| ||||| | |||| ||||| | || || ||||| || | |||||||| | Sbjct 27679 TGTAGCTGTTAGTAATGTAGGG-ATCATTAATACTCCAAACCAACCTATGTAGAGACGAT 27737 Query 26832 TCTCAGTACTTGTAACCCACTCACAAAACCTCTCCCA 26868 | || || || |||| ||| |||||| | ||||| Sbjct 27738 TTTCTGTGCTAGTAATCCAAGAACAAAAACGTTCCCA 27774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147711240483360