Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020875.1 Length=182801 Score E Sequences producing significant alignments: (Bits) Value seq36 432 4e-116 >seq36 Length=158315 Score = 432 bits (478), Expect = 4e-116 Identities = 619/872 (71%), Gaps = 0/872 (0%) Strand=Plus/Minus Query 155074 TTCATTGCTGCACCTCCTGTAGACATTGATGGTATTCGTGAACCCGTCGCTGGTTCTTTA 155133 || || ||||| || || || || || || |||||| | ||||| || | || || || Sbjct 27660 TTTATAGCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATCATTG 27601 Query 155134 ATGTATGGTAACAACATCATCTCTGGTGCTGTTGTCCCTAGTTCAAACGCAATTGGTCTC 155193 | ||||| || || || || |||||||| |||| |||| || || ||||| || | Sbjct 27600 TTATATGGAAATAATATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGGAATA 27541 Query 155194 CACTTCTATCCTATTTGGGAAGCAGCAACTCTTGATGAGTGGTTGTACAATGGTGGTCCT 155253 || |||||||||||||||||||||||| || | ||||| ||| | || ||||| |||||| Sbjct 27540 CATTTCTATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCT 27481 Query 155254 TTCCAACTTGTAGTCTTCCACTTCCTTATCGGAATCACAGCATACTGTGGTCGTCAGTGG 155313 | || | |||| || |||||| |||| ||||| ||||| || ||| | ||| Sbjct 27480 TATGAATTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGG 27421 Query 155314 GAACTTTCTTACCGTCTTGGCATGCGTCCTTGGATCTGTGTTGCATACTCTGCACCAGTA 155373 ||| | || |||||||| |||||||||||||| || || | ||| || || || Sbjct 27420 GAATTAAGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTT 27361 Query 155374 TCTGCTGCGTTCGCTGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCG 155433 |||| || |||||||| || | |||||| | || |||||| ||| || |||| Sbjct 27360 GCTGCAGCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGT 27301 Query 155434 ATGCCTCTTGGTATCTCTGGTACTTTTAACTATATGTTCGTGTTCCAAGCAGAACACAAT 155493 ||||| | ||||| |||||||||||||| | |||||| || |||||||| ||||| ||| Sbjct 27300 ATGCCATTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAAT 27241 Query 155494 ATCCTTATGCACCCCTTCCACATGCTTGGAGTAGCAGGTGTGTTCGGTGGATCTCTTTTC 155553 || | ||||| || || || ||| | || || || ||||| || || || || | || Sbjct 27240 ATTTTAATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTT 27181 Query 155554 TCTGCTATGCACGGTTCATTGGTGACATCTTCACTAATCCGTGAAACTACTGAGCAAGAG 155613 ||| |||||||| || | || || || | || |||||||| || ||| | ||| Sbjct 27180 AGTGCAATGCACGGCTCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAATGAG 27121 Query 155614 TCTCAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAAACTTATAACATTGTTGCTGCT 155673 ||| ||| ||||||| || || || |||||| | |||||||||||||| ||||||||| Sbjct 27120 TCTGCAAACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCT 27061 Query 155674 CATGGATACTTCGGTCGTCTTATCTTCCAGTATGCATCCTTCAACAACTCAAGAAGTCTT 155733 ||||| || || || | | || ||||| |||||| ||| || || ||| | | Sbjct 27060 CATGGTTATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTA 27001 Query 155734 CACTTCTTCCTTGCTGCATGGCCTGTGGTCTGCATCTGGGCAACTGCTATGGGTGTGTCA 155793 || |||||| | ||| |||||| || || || || ||| || || | ||| | Sbjct 27000 CATTTCTTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGC 26941 Query 155794 ACGATGGCATTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTAGTAGACGCTAGTGGT 155853 || |||||||| ||| | || || || || || || || ||||| || || || || Sbjct 26940 ACAATGGCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGA 26881 Query 155854 AAAGTCATCCCTACATGGGCAGACATTCTTAACCGCGCTGGTCTTGGTATGGAAGTAATG 155913 | ||| || ||| ||||| || ||| | || || || | | || || ||||||||| Sbjct 26880 AGAGTAATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATG 26821 Query 155914 CACGAGCGTAACGCTCACAACTTCCCTCTTGA 155945 || || ||||| || || ||||| ||||| || Sbjct 26820 CATGAACGTAATGCACATAACTTTCCTCTAGA 26789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 584832034579480