Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_020878.1 Length=44945 Score E Sequences producing significant alignments: (Bits) Value seq36 453 3e-123 >seq36 Length=158315 Score = 453 bits (502), Expect = 3e-123 Identities = 696/987 (71%), Gaps = 8/987 (1%) Strand=Plus/Plus Query 40533 GCTAAGTCTAGAGGAAAGTTGTGAGCGTTACGCTCGTGCATTACTTCCATACCTAGACTC 40592 ||||| |||||||||||||| || || ||||| || ||||||||||| || |||| | | Sbjct 26783 GCTAAATCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATTT 26842 Query 40593 TGTCTGTTAAGAACATCAGCCCAAGTAGGAATGACTTTACCATTAGCGTCTACTACTGAC 40652 | || | || ||||||||||||| ||| ||| | || | || || || || || Sbjct 26843 GCACGATTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGAT 26902 Query 40653 TGGTTAAAGTTAAAACCATTGAGGTTAAAAGCCATAGTAGATATACCCATGGAGGTAAGC 40712 || ||||| ||||| ||||| | |||||| ||||| || ||||| | || || ||| Sbjct 26903 TGATTAAAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAGC 26962 Query 40713 CATATGCCAATAACCGGG---AAAGCACCAAGAAAGAAGTGTAGCGCACGGCTATTGTTG 40769 || || | | || || ||||| ||||| ||| |||| | || ||| || Sbjct 26963 CAAATACATACTACTGGCCATAAAGCT--AAGAA-GAAATGTAATGAGCGTGAATTATTA 27019 Query 40770 AATGAAGCATATTGAAATATTAGTCTACCAAAGTAACCGTGTGCAGCTACGATGTTATAA 40829 || |||||||| || |||| ||| ||||| ||||| || ||||| |||||||||||| Sbjct 27020 AAGCTTGCATATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAA 27079 Query 40830 GTCTCGCCTTCCTGACCAAACTTATACCCGTAGTTCTGTGATTCAGTTTCCGTGGTCTCC 40889 || || ||| || ||||| ||||| || | ||| || ||| | || || || || Sbjct 27080 GTTTCATATTCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCA 27139 Query 40890 CGAATGATTGAGGAAGTAACAAGGCTTCCGTGCATAGCAGCAAACAAAGCACCACCAAAG 40949 || || | ||||| ||||| |||||||| ||| ||| || | ||| ||||| Sbjct 27140 CGTATCAAACTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAAT 27199 Query 40950 ACGCCTGCAACGCCGAGCATATGGAATGGGTGCATGAGAATGTTGTGTTCTGCTTGGAAG 41009 || || ||||| || | |||||| || || ||||| | ||| || ||||| |||||||| Sbjct 27200 ACACCAGCAACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAA 27259 Query 41010 ACAAACATGAAGTTGAATGTTCCACTGATTCCTAAAGGCATACCATCAGAGAAAGAACCC 41069 || ||||| || || || || ||| || ||||| ||||||||||| || ||| ||| Sbjct 27260 ACTAACATAAAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCT 27319 Query 41070 TGACCGAATGGATAAACTAAGAATACAGCTAGAGCTGCTGACAATGGAGCTGTGTATGCC 41129 || || | ||||| | | ||||||||| ||||| | | ||||||| | | || Sbjct 27320 TGTCCAATAGGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCT 27379 Query 41130 ACAAATATCCATGGTCTCATACCTAGTCTGTATGAAAGTTCCCACTGTCTACCAGCGTAT 41189 || |||||| || | ||| || || | || | |||||| | | || ||| Sbjct 27380 ACGGCTATCCAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATAT 27439 Query 41190 GCTGCTACTCCTATTAAAAAGTGAAAGACAATGAGTTGATATGGTCCGCCGTTGTATAGC 41249 || | ||| || || ||||| || || || | || ||| || ||||| || |||||| Sbjct 27440 GCACAAATTCCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGC 27499 Query 41250 CACTCGTCCAGTGTGCCGGCTTCCCAGATTGGGTAGAAATGTAGTCCGATTGCGTTAGAG 41309 || || || | | | |||||||| || || |||||||||| ||| ||||| ||||| Sbjct 27500 CATTCATCTAAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGAT 27559 Query 41310 CTCGGAACGACAGCTCCAGATATAATATTGTTCCCGTACATTAACGAGCCGGAAACGGGC 41369 | || || | ||| |||| ||||||||| || || || | || || || ||||| || Sbjct 27560 GTAGGTACAATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGT 27619 Query 41370 TCACGTATGCCATCTATATCTACAGGCGGTGCTGCGATAAAGGCGATTATGAA-ACATGT 41428 || | || || |||||||| || || || || || ||||| | ||||| || ||| | Sbjct 27620 TCTCTAATACCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACA-GA 27678 Query 41429 GGTAGCAGTTAGTAATGCTGGAATCATTAGCACACCAAACCAACCTACGTATAGGCGGTT 41488 ||||| |||||||||| || ||||||| || ||||||||||||| ||| || || || Sbjct 27679 TGTAGCTGTTAGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGATT 27738 Query 41489 GTCGGTGCTAGTGACCCAGTTACAAAA 41515 || |||||||| | ||| |||||| Sbjct 27739 TTCTGTGCTAGTAATCCAAGAACAAAA 27765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143701661100222