Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_021071.1 Length=177211 Score E Sequences producing significant alignments: (Bits) Value seq36 493 1e-134 >seq36 Length=158315 Score = 493 bits (546), Expect = 1e-134 Identities = 681/953 (71%), Gaps = 0/953 (0%) Strand=Plus/Plus Query 67368 TCAAGAGGGAAGTTGTGAGCGTTACGCTCGTGCATAACTTCCATTCCAAGTCCTGCTCTG 67427 || ||||| ||||| || || ||||| || ||||| ||||| ||||| | ||| | Sbjct 26789 TCTAGAGGAAAGTTATGTGCATTACGTTCATGCATTACTTCTATTCCTAAATTTGCACGA 26848 Query 67428 TTAAGGATGTCTGCCCAAGTAGGAATCACTTTACCACCTGCGTCAACGACGGATTGGTTG 67487 || | || || ||||||||| ||| ||| | || | ||||| || ||||| || Sbjct 26849 TTTAAAATATCAGCCCAAGTATTAATTACTCTTCCTTGAGAATCAACAACAGATTGATTA 26908 Query 67488 AAGTTGAAACCGTTGAGGTTGAATGCCATAGTTGACACACCCATTGCAGTGAACCAGATG 67547 || || || || || | ||| |||||||| || | ||| | | |||| ||| || Sbjct 26909 AAATTAAATCCATTTAAGTTAAATGCCATTGTGCTGATACCTAAAGATGTGAGCCAAATA 26968 Query 67548 CAGACCACAGGGAATGCAGCAAGGAAGAAGTGAAGACTTCTTGAGTTGTTGAAAGATGCA 67607 || || || || || ||| | |||||| || | | ||| || || || |||| Sbjct 26969 CATACTACTGGCCATAAAGCTAAGAAGAAATGTAATGAGCGTGAATTATTAAAGCTTGCA 27028 Query 67608 TACTGGAAGATCAAGCGACCGAAGTATCCATGAGCAGCAACAATGTTGTAAGTCTCTTCT 67667 || ||||| || || | || || || |||||||||||||| ||||| ||||| || | | Sbjct 27029 TATTGGAAAATTAATCTTCCAAAATAACCATGAGCAGCAACGATGTTATAAGTTTCATAT 27088 Query 67668 TCTTGTCCGAACTTGTAACCGTAGTTCTGTGACTCTTGCTCAGTAGTTTCTCTGATAAGA 67727 ||||| || || || ||||| | ||| ||||| | ||| || ||||| | || | | Sbjct 27089 TCTTGGCCAAATTTATAACCATTGTTTGCAGACTCATTCTCTGTTGTTTCACGTATCAAA 27148 Query 67728 GAAGAAGTAACAAGAGAACCGTGCATAGCACTAAAGAGTGAACCACCGAATACACCTGCT 67787 ||||| |||||||| |||||||| |||||||| | |||||| || |||||||| || Sbjct 27149 CTTGAAGTTACAAGAGAGCCGTGCATTGCACTAAATAATGAACCTCCAAATACACCAGCA 27208 Query 67788 ACTCCAAGCATATGGAATGGGTGCATAAGGATGTTGTGCTCTGCTTGGAACACGAACATG 67847 || || | |||||| || || ||||| | || || || || |||||||| || ||||| Sbjct 27209 ACACCCATCATATGAAACGGATGCATTAAAATATTATGTTCAGCTTGGAAAACTAACATA 27268 Query 67848 TAGTTAAAAGTACCAGAAATACCAAGAGGCATTGCGTCAGAGAAAGAACCTTGACCGAAA 67907 | |||||||||||||||||||| | ||||| | || || ||| |||||| || | | Sbjct 27269 AAATTAAAAGTACCAGAAATACCTAATGGCATACCATCTGAAAAACTACCTTGTCCAATA 27328 Query 67908 GGATAGACCAAGAACACAGCGAATGCTGCAGACACTGGAGCAGAGTATGCTACACAGATC 67967 ||||||| | || ||||| ||||||| || ||||| ||| | ||||| ||| Sbjct 27329 GGATAGATAATAAATACAGCTGTGGCTGCAGCAACAGGAGCTGAGAAAGCTACGGCTATC 27388 Query 67968 CAAGGACGCATACCAAGACGGTAAGAAAGTTCCCACTGACGACCACAGTATGCTGTGATT 68027 ||||||||||| |||||||| || | |||||| | ||| || ||||| ||| Sbjct 27389 CAAGGACGCATTCCAAGACGATAGCTTAATTCCCATTCACGTCCCATATATGCACAAATT 27448 Query 68028 CCGATAAGGAAGTGGAAGACTACAAGTTGGAAAGGTCCACCATTATACAACCACTCATCT 68087 || |||| |||||| || |||| | || |||| || |||||||| | ||| |||||| Sbjct 27449 CCAATAAAGAAGTGCAAAACTATTAATTCATAAGGACCGCCATTATATAGCCATTCATCT 27508 Query 68088 AGAGTTGCTGCTTCCCAGATAGGATAGAAGTGAAGACCGATTGCGTTTGAACTAGGAACA 68147 | || |||||||||||| ||||||||||| || | || ||||| || || |||| ||| Sbjct 27509 AAAGATGCTGCTTCCCAAATAGGATAGAAATGTATTCCTATTGCATTAGATGTAGGTACA 27568 Query 68148 ACAGCACCAGAAATGATGTTGTTACCGTACATGAGCGAACCTGCAACAGGTTCTCTGATA 68207 | |||||||| || || || || || || | | || |||| ||| |||||||| ||| Sbjct 27569 ATAGCACCAGTTATAATATTATTTCCATATAACAATGATCCTGAAACTGGTTCTCTAATA 27628 Query 68208 CCATCGATATCAACTGGAGGTGCTGCAATGAATGCAATGATGAAGCAAGTTGCTGCTGCG 68267 || || ||||||||||| || || || || ||| |||| || || || || |||| Sbjct 27629 CCGTCTATATCAACTGGTGGAGCAGCTATAAATCCAATTATAAATACAGATGTAGCTGTT 27688 Query 68268 AGCAAGCAAGGAATCATCAACACACCGAACCAACCAACATAGATGCGATTGTC 68320 || || ||| ||||| || || || |||||||| | |||| ||||| || Sbjct 27689 AGTAATGTAGGGATCATTAATACTCCAAACCAACCTATGTAGAGACGATTTTC 27741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 566944131398280