Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_025456.1 Length=46547 Score E Sequences producing significant alignments: (Bits) Value seq36 486 6e-133 >seq36 Length=158315 Score = 486 bits (538), Expect = 6e-133 Identities = 689/956 (72%), Gaps = 12/956 (1%) Strand=Plus/Minus Query 19532 AACCGTCTTTATGTTGGGTGGTTTGGAACACTGATGATTCCGTGTCTCCTTGCAGCCACC 19591 || ||||| || | || ||||||||| | | ||||| || | || |||| || Sbjct 27738 AATCGTCTCTACATAGGTTGGTTTGGAGTATTAATGATCCCTACATTACTAACAGCTAC- 27680 Query 19592 ATCTGC-TTCATTATTGCATTCATTGCGGCTCCACCAGTTGACATTGATGGCATCCGCGA 19650 ||||| || || |||| ||| || || |||||||||||||| || || || || | || Sbjct 27679 ATCTGTATTTATAATTGGATTTATAGCTGCTCCACCAGTTGATATAGACGGTATTAGAGA 27620 Query 19651 ACCCGTATCCGGTAGCCTTCTT-TATGGAAACAACATCATATCGGGAGCCGTCGTTCCGA 19709 ||| || || || | | || || |||||||| || || ||| | || || | || || | Sbjct 27619 ACCAGTTTCAGG-ATCATTGTTATATGGAAATAATATTATAACTGGTGCTATTGTACCTA 27561 Query 19710 GCAGC-AATGCCATCGGACTACACTTCTACCCAATTTGGGAAGCTAGTTCACTTGATGAA 19768 || | ||||| || ||| |||| ||||| || ||||||||||| || | |||||| Sbjct 27560 -CATCTAATGCAATAGGAATACATTTCTATCCTATTTGGGAAGCAGCATCTTTAGATGAA 27502 Query 19769 TGGCTCTACAACGGGGGACCGTTCCAACTTGTGGTCTTCCACTTCCTCATTGGCATCTAT 19828 ||||| || || || || || | || | | || || |||||| | ||||| || | | Sbjct 27501 TGGCTATATAATGGCGGTCCTTATGAATTAATAGTTTTGCACTTCTTTATTGGAATTTGT 27442 Query 19829 GCTTACATGGGACGAGAGTGGGAACTTAGCTATCGACTAGGAATGAGGCCTTGGATTTGT 19888 || || |||||||| || |||||| | |||||||| || |||||| | |||||||| Sbjct 27441 GCATATATGGGACGTGAATGGGAATTAAGCTATCGTCTTGGAATGCGTCCTTGGATAGCC 27382 Query 19889 GTTGCCTACTCTGCTCCGGTTGCAGCCGCCTCTGCGGTCTTTCTCGTCTACCCGTTTGGT 19948 || || | ||| ||||| ||||| || ||| | || || ||| | |||| || |||| Sbjct 27381 GTAGCTTTCTCAGCTCCTGTTGCTGCAGCCACAGCTGTATTTATTATCTATCCTATTGGA 27322 Query 19949 CAGGGTAGCTTCTCCGATGCTATGCCTTTGGGTATCTCGGGTACGTTCAACTACATGTTG 20008 || ||||| || || |||| |||||| || ||||| || ||||| || || | ||||| Sbjct 27321 CAAGGTAGTTTTTCAGATGGTATGCCATTAGGTATTTCTGGTACTTTTAATTTTATGTTA 27262 Query 20009 GTATTCCAAGCCGAACATAACATTCTCATGCACCCGTTCCACATGCTTGGTGTGGCTGGT 20068 || |||||||| |||||||| ||| | ||||| ||||| || ||| | ||||| |||||| Sbjct 27261 GTTTTCCAAGCTGAACATAATATTTTAATGCATCCGTTTCATATGATGGGTGTTGCTGGT 27202 Query 20069 GTATTCGGTGGGTCACTATTCAGTGCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-T 20127 ||||| || || ||| |||| ||||| |||||||| || ||||| || | | | ||| | Sbjct 27201 GTATTTGGAGGTTCATTATTTAGTGCAATGCACGGCTCTCTTGTAAC-TTCAAGTTTGAT 27143 Query 20128 GCGTGAGACTACTGAACAGGAAAGTCAG--AACTATGGTTACAAGTTTGGGCAAGAAGAA 20185 ||||| || || || | | |||| | ||| ||||||| || ||||| |||||| | Sbjct 27142 ACGTGAAACAACAGAGAATG--AGTCTGCAAACAATGGTTATAAATTTGGCCAAGAATAT 27085 Query 20186 GAGACCTATAACATCGTAGCCGCTCATGGTTACTTTGGACGTTTGATCTTCCAATACGCT 20245 || || ||||||||||| || ||||||||||| |||||| | || || |||||||| || Sbjct 27084 GAAACTTATAACATCGTTGCTGCTCATGGTTATTTTGGAAGATTAATTTTCCAATATGCA 27025 Query 20246 TCTTTCAACAATAGCCGTTCTCTACACTTCTTCCTTGCTGCCTGGCCGGTGGTAGGGATT 20305 || || ||| || || |||| |||||| | ||| ||||| || ||| | ||| Sbjct 27024 AGCTTTAATAATTCACGCTCATTACATTTCTTCTTAGCTTTATGGCCAGTAGTATGTATT 26965 Query 20306 TGGTTCGCTGCCTTGGGCGTTTCTACAATGGCGTTTAATCTGAACGGTTTCAACTTTAAC 20365 ||| || | | || || | |||||||| ||||| | || || || || ||||| Sbjct 26964 TGGCTCACATCTTTAGGTATCAGCACAATGGCATTTAACTTAAATGGATTTAATTTTAAT 26905 Query 20366 CAGTCCCTTCTCGACAACAATGGTCGTGTCATTGATACTTGGGCTGACATTCTCAATCGT 20425 || || || | || | || | || ||| ||||||||||||| ||| | |||||| Sbjct 26904 CAATCTGTTGTTGATTCTCAAGGAAGAGTAATTAATACTTGGGCTGATATTTTAAATCGT 26845 Query 20426 GCTAATCTCGGGTTTGAGGTGATGCATGAACGGAATGCTCATAACTTCCCACTTGA 20481 || ||| | || | || || ||||||||||| ||||| |||||||| || || || Sbjct 26844 GCAAATTTAGGAATAGAAGTAATGCATGAACGTAATGCACATAACTTTCCTCTAGA 26789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148828034740914