Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_025464.1 Length=44147 Score E Sequences producing significant alignments: (Bits) Value seq36 518 9e-143 >seq36 Length=158315 Score = 518 bits (574), Expect = 9e-143 Identities = 719/996 (72%), Gaps = 8/996 (1%) Strand=Plus/Minus Query 18715 TGGGACTCTTTTTGTGACTGGGTAACCAGTACAGATAACCGTCTTTATATCGGCTGGTTT 18774 ||||| ||||||| ||| | || || ||||| || ||||| || || || |||||| Sbjct 27774 TGGGAACGTTTTTGTTCTTGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTT 27715 Query 18775 GGAACACTGATGATTCCGTGTCTCCTTGCAGCTACTATTTGT-TTCATTATTGCCTTCAT 18833 ||| | | ||||| || | || ||||||| || ||| || || |||| || || Sbjct 27714 GGAGTATTAATGATCCCTACATTACTAACAGCTAC-ATCTGTATTTATAATTGGATTTAT 27656 Query 18834 TGCTGCACCTCCTGTAGACATTGATGGCATCCGCGAGCCTGTTGCAGGCAGTCTTCTT-T 18892 ||||| || || || || || || || || | || || ||| |||| | || || | Sbjct 27655 AGCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGG-ATCATTGTTAT 27597 Query 18893 ATGGAAACAACATCATATCGGGAGCCGTCGTTCCGAGCAGC-AATGCCATCGGACTACAC 18951 ||||||| || || ||| | || || | || || | || | ||||| || ||| |||| Sbjct 27596 ATGGAAATAATATTATAACTGGTGCTATTGTACCTA-CATCTAATGCAATAGGAATACAT 27538 Query 18952 TTCTACCCAATTTGGGAAGCTAATTCACTTGATGAATGGCTCTACAACGGGGGACCGTTC 19011 ||||| || ||||||||||| || | ||||||||||| || || || || || | Sbjct 27537 TTCTATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTAT 27478 Query 19012 CAACTTGTGGTCTTCCACTTCCTCATTGGCGTCTATGCTTACATGGGACGCGAGTGGGAA 19071 || | | || || |||||| | ||||| | | ||| || |||||||| || |||||| Sbjct 27477 GAATTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAA 27418 Query 19072 CTTAGCTATCGACTAGGGATGCGCCCTTGGATTTGTGTTGCCTACTCAGCTCCTGTTGCC 19131 | |||||||| || || ||||| |||||||| || || | ||||||||||||||| Sbjct 27417 TTAAGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCT 27358 Query 19132 GCAGCCTCTGCGGTCTTCCTTGTCTATCCATTTGGTCAAGGTTCCTTTAGCGACGCTATG 19191 |||||| | || || || || ||||||| |||| |||||| ||| || | |||| Sbjct 27357 GCAGCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATG 27298 Query 19192 CCTTTGGGTATTAGTGGTACGTTCAACTACATGCTTGTATTCCAGGCTGAACATAACATC 19251 || || |||||| |||||| || || | ||| | || ||||| ||||||||||| || Sbjct 27297 CCATTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATT 27238 Query 19252 CTCATGCACCCGTTCCACATGCTCGGTGTCGCTGGTGTGTTCGGCGGGTCACTATTTAGT 19311 | ||||| ||||| || ||| | ||||| |||||||| || || || ||| |||||||| Sbjct 27237 TTAATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGT 27178 Query 19312 GCGATGCACGGTTCGCTTGTTACGTCCTCGCTTG-TGCGTGAAACTACTGAAGAGGTATC 19370 || |||||||| || ||||| || || | ||| | |||||||| || || | | || Sbjct 27177 GCAATGCACGGCTCTCTTGTAACTTCAA-GTTTGATACGTGAAACAACAGAGAATGAGTC 27119 Query 19371 TCAGAACTATGGCTACAAGTTTGGGCAAGAAGAAGAGACTTATAACATTGTTGCTGCTCA 19430 | ||| |||| || || ||||| |||||| | || ||||||||||| ||||||||||| Sbjct 27118 TGCAAACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCA 27059 Query 19431 TGGGTATTTTGGTCGGCTTATTTTCCAGTACGCATCCTTCAACAATAGCCGTTCTCTACA 19490 ||| |||||||| | | |||||||| || ||| ||| || ||| || || |||| Sbjct 27058 TGGTTATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACA 26999 Query 19491 TTTCTTTTTGGCTGCTTGGCCTGTGGTTGGCATTTGGTTTGCCGCCCTTGGGGTAAGCAC 19550 |||||| || ||| ||||| || || | |||||| | | | | || | ||||| Sbjct 26998 TTTCTTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCAC 26939 Query 19551 CATGGCATTCAACTTGAATGGCTTTAACTTTAACCAGTCCCTTCTTGACAACAATGGTCG 19610 |||||||| ||||| ||||| ||||| ||||| || || || |||| | || | Sbjct 26938 AATGGCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGAAG 26879 Query 19611 TGTCATTGATACTTGGGCTGACATTCTCAATCGTGCTAACCTCGGCTTTGAGGTAATGCA 19670 || ||| ||||||||||||| ||| | |||||||| || | || | || |||||||| Sbjct 26878 AGTAATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCA 26819 Query 19671 CGAACGTAATGCTCATAACTTCCCACTTGATTTGGC 19706 ||||||||||| |||||||| || || ||||| || Sbjct 26818 TGAACGTAATGCACATAACTTTCCTCTAGATTTAGC 26783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141148074230514