Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_026923.1 Length=179110 Score E Sequences producing significant alignments: (Bits) Value seq36 562 3e-155 >seq36 Length=158315 Score = 562 bits (622), Expect = 3e-155 Identities = 733/1009 (73%), Gaps = 4/1009 (0%) Strand=Plus/Plus Query 159370 AGGGGGTGGTTTGATGTCCTGGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGT 159429 || |||||||| || | | ||||| ||||| ||||| ||||| ||||||||| | || Sbjct 39768 AGAGGGTGGTTCGACTTAGTTGATGATTGGCTAAAACGTGATCGATTTGTCTTTATTGGA 39827 Query 159430 TGGTCTGGACTCCTACTTCTTCCCACTGCTTATATGGCCATTGGCGGTTGGCTTACTGGC 159489 ||||| || | |||||| |||| | | ||| | || | || | ||| |||| || Sbjct 39828 TGGTCAGGTTTGCTACTTTTTCCATGTTCATATCTAGCTCTAGGTGCCTGGTTTACAGGT 39887 Query 159490 ACGACTTTTATCACGAGTTGGTACACCCACGGTCTTGCTAGTTCCTACCTTGAAGGTGCT 159549 || |||||| | || |||||| || || ||| | ||| ||| || | ||||| | Sbjct 39888 ACAACTTTTGTTACTTCTTGGTATACGCATGGTTTAGCTTCTTCTTATTTAGAAGGATGT 39947 Query 159550 AATTTTCTCACGGCAGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTA 159609 |||||| | || || || || |||| ||||| || |||||| || || || || | Sbjct 39948 AATTTTTTAACCGCTGCAGTATCAAGTCCTGCAAATAGTATGGGACACTCA-TTATTATT 40006 Query 159610 CTT-TGGGGTCCTGAGTCTCAAGGCGACTTCCAACGCTGGTGCCAACTTGGAGGGATTTG 159668 || ||||| || || ||||||| || || | ||||| ||| ||||||| |||| Sbjct 40007 TTTATGGGGACCAGAAGCTCAAGGTGATTTTACTAGATGGTGTCAAATTGGAGGTCTTTG 40066 Query 159669 GTCCTTTGTTGCTCTCCACGGTGCATTCGCTCTCATAGGTTTTATGCTACGGCAATTTGA 159728 | | ||| |||| | || ||||| || || | ||||||||| | || |||||||| Sbjct 40067 GACTTTTACTGCTTTACATGGTGCTTTTGCCTTGATAGGTTTTTGTTTGCGTCAATTTGA 40126 Query 159729 AATTGCTCGTCTAGTTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGC 159788 ||| || | |||| || || | || |||||||| || || || || || || ||||| Sbjct 40127 AATAGCCAGATTAGTCGGAATTAGGCCATACAATGCAATAGCTTTTTCAGGACCAATTGC 40186 Query 159789 TGTTTTTGTCAGCGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACC 159848 |||||||| ||||| ||||| |||||||| || || || ||||| ||||| || Sbjct 40187 AGTTTTTGTTTCAGTATTTCTTATTTATCCACTTGGGCAAGCTAGTTGGTTTTTTGCTCC 40246 Query 159849 TAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAGGGTTTCCACAACTG 159908 |||||| || || ||||| |||||| |||| | || || | || |||||||| || || Sbjct 40247 TAGTTTTGGAGTTGCAGCTATCTTTCGATTTATTTTATTTTTACAAGGTTTCCATAATTG 40306 Query 159909 GACCCTCAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGTGGAGCACTGTTGTG 159968 ||| | || || || ||||||||||| |||||||| ||||| || |||||| | | || Sbjct 40307 GACTTTAAATCCATTTCATATGATGGGTGTTGCTGGAATACTCGGAGGAGCATTACTTTG 40366 Query 159969 TGCAATCCATGGTGCTACTGTAGAGAACACATTGTTTGAAGATGGAGAACAAGCAAACAC 160028 ||| || ||||| || ||||||||||| ||||| || |||||||| ||| || || || Sbjct 40367 TGCTATTCATGGAGCGACTGTAGAGAATACATTATTCGAAGATGGCGAAGCTGCTAATAC 40426 Query 160029 ATTTAAGGCGTTTGAGCCTACTCAAGAAGAAGAGACTTATTCTATGGTCACTGCAAACCG 160088 || | ||| ||| || || ||| ||| || |||||||| ||||| || || || || Sbjct 40427 TTTCAGGGCTTTTACACCAACACAATCAGAGGAAACTTATTCAATGGTTACGGCTAATCG 40486 Query 160089 CTTCTGGTCGCAGATCTTCGGTGTTGCATTTTCTAACAAGCGGTGGCTTCATTTTTTCAT 160148 || ||||| || || || |||||||||||||||||||| | ||||| |||||||| || Sbjct 40487 TTTTTGGTCACAAATTTTTGGTGTTGCATTTTCTAACAAAAGATGGCTACATTTTTTTAT 40546 Query 160149 GTTGTTTGTGCCTGTTATGGGTCTATGGACATCCTCTATTGGCATTATTGGTCTTGCTTT 160208 | | |||||||| |||| || |||||||| ||||||||| || || || ||||| || Sbjct 40547 GCTATTTGTGCCAGTTACAGGATTATGGACAAGCTCTATTGGTATCATAGGACTTGCATT 40606 Query 160209 CAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATTA-GAGCAGCAGAAGATCCTGAAT 160267 || | ||||| || ||||| || ||| || |||| | || ||||| || || |||| Sbjct 40607 AAATTTACGTGCATATGATTTTGTCTCTCAAGA-ATTACGTGCCGCAGAGGACCCAGAAT 40665 Query 160268 TTGAGACCTTCTACACCAAGAACATCCTATTGAATGAAGGACTTCGTGCTTGGATGGCAC 160327 ||||||| || || || || || | || | |||||||| | | || ||||||||| Sbjct 40666 TTGAGACTTTTTATACTAAAAATTTACTTCTAAATGAAGGTATAAGAGCATGGATGGCAA 40725 Query 160328 CTGCTGATCAACCACATGAAAACTTTATCTTCCCTGAGGAAGTACTACC 160376 | ||||||||||||||||| ||| | ||||| ||||| || |||| Sbjct 40726 CACAAGATCAACCACATGAAAATTTTGTATTCCCAGAGGAGGTTTTACC 40774 Score = 446 bits (494), Expect = 2e-120 Identities = 665/939 (71%), Gaps = 6/939 (1%) Strand=Plus/Minus Query 157718 GGTTGGTTCGGTGTACTGATGATTCCTACGTTGCTTGCTGCAACTATCTGT-TTCATCGT 157776 |||||||| || ||| | ||||| ||||| || || | || || |||||| || || | Sbjct 27723 GGTTGGTTTGGAGTATTAATGATCCCTACATTACTAACAGCTAC-ATCTGTATTTATAAT 27665 Query 157777 CGCCTTCGTCGCTGCTCCCCCTGTGGACATTGACGGCATCCGCGAACCAGTTGCTGGTTC 157836 | || | |||||||| || || || || ||||| || | ||||||||| | || || Sbjct 27664 TGGATTTATAGCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATC 27605 Query 157837 ACTCATGTATGGTAACAACATCATCTCTGGTGCAGTTGTTCCTAGTTCAAACGCAATCGG 157896 | | | ||||| || || || || ||||||| |||| |||| || || ||||| || Sbjct 27604 ATTGTTATATGGAAATAATATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGG 27545 Query 157897 TCTCCACTTCTACCCCATCTGGGAAGCAGCATCTCTTGACGAGTGGCTGTATAACGGTGG 157956 | || ||||| || || ||||||||||||||| | || || ||||| ||||| || || Sbjct 27544 AATACATTTCTATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGG 27485 Query 157957 TCCTTTCCAACTTGTAGTATTCCACTTCCTGATCGGCATCTATGCCTATATGGGACGTGA 158016 ||||| || | |||| || |||||| | || || || | ||| |||||||||||||| Sbjct 27484 TCCTTATGAATTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGA 27425 Query 158017 GTGGGAACTCTCTTACCGTTTAGGTATGCGCCCATGGATCTGTGTAGCATATTCTGCTCC 158076 |||||| | || ||| | || ||||| || ||||| ||||| | || ||||| Sbjct 27424 ATGGGAATTAAGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCC 27365 Query 158077 AGTCGCTGCAGCGAGTGCAGTATTCCTAGTCTATCCTTTCGGTCAAGGTTCTTTCTCCGA 158136 || |||||||| | || ||||| | |||||||| | || |||||| ||| || || Sbjct 27364 TGTTGCTGCAGCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGA 27305 Query 158137 TGCTATGCCTCTTGGTATCTCTGGTACTTTTAACTACATGCTTGTATTCCAAGCAGAACA 158196 || |||||| | ||||| |||||||||||||| | ||| | || |||||||| ||||| Sbjct 27304 TGGTATGCCATTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACA 27245 Query 158197 CAACATCCTTATGCACCCGTTCCATATGCTCGGTGTTGCTGGGGTATTCGGTGGATCTCT 158256 || || | ||||| ||||| |||||| | ||||||||||| ||||| || || || | Sbjct 27244 TAATATTTTAATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATT 27185 Query 158257 TTTCTCTGCTATGCATGGAAGTCTCGTTACTTCCTCACTCGTTCGTGAAACGACTGAAAC 158316 || ||| ||||| || ||| || ||||| | | |||||||| || || | Sbjct 27184 ATTTAGTGCAATGCACGGCTCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAA 27125 Query 158317 AGAGTCACAGAACTACGGTTATAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGC 158376 ||||| ||| | |||||||| || || |||||| | || || || ||||||||||| Sbjct 27124 TGAGTCTGCAAACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGC 27065 Query 158377 AGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTC 158436 || ||||| || || || | || || |||||||| || || || || || || || Sbjct 27064 TGCTCATGGTTATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTC 27005 Query 158437 CTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGT 158496 || || |||||| | ||| |||||| || || | || ||| |||| ||| || Sbjct 27004 ATTACATTTCTTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCAC--ATCTTTAGGT 26947 Query 158497 GTCA--ACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGT 158554 ||| || |||||||| ||| | || || || || || || || || | ||||| | Sbjct 26946 ATCAGCACAATGGCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCT 26887 Query 158555 CAGGGTCGTGTGTTGAACACCTGGGCAGATGTACTGAACCGCGCTGGTCTTGGTATGGAA 158614 || || | || | || || ||||| ||| | | || || || | | || || ||| Sbjct 26886 CAAGGAAGAGTAATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAA 26827 Query 158615 GTTATGCATGAGCGTAACGCACACAACTTCCCACTGGAT 158653 || |||||||| ||||| ||||| ||||| || || ||| Sbjct 26826 GTAATGCATGAACGTAATGCACATAACTTTCCTCTAGAT 26788 Score = 98.7 bits (108), Expect = 1e-15 Identities = 136/188 (72%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 158838 GATCAGTACATTCTAGACGCTGCAGAAGAGGCAGGAGTTGATATTAACTATTCCTGTCGT 158897 ||||| || || |||| || || ||||| |||| | ||| | |||||| ||| | Sbjct 69674 GATCAATATATATTAGATGCAGCTGAAGAACAAGGATTAGATCTACCCTATTCTTGTAGA 69733 Query 158898 GCTGGTGCCTGTTCTTCCTGTGCTGGTAAACTTGTCAGCGGAACT-GTTGACCAAAGCGA 158956 || || || |||||| | ||||| |||||||| || || | || || || ||| || Sbjct 69734 GCAGGAGCATGTTCTACTTGTGCAGGTAAACT-GTTAGAAGGACAAGTAGATCAATCTGA 69792 Query 158957 TCAGTCATTCTTGGATGATGATCAGATTGCAGAAGGATTTATCCTTACGTGTGTATCTTA 159016 ||||||||| | |||||||||||| | || ||||||| |||| || ||||| | || Sbjct 69793 TCAGTCATTTCTAGATGATGATCAGGTAAAAGCAGGATTTGTCCTAACATGTGTTGCATA 69852 Query 159017 TCCCACTT 159024 ||| |||| Sbjct 69853 TCCTACTT 69860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 573020898507600