Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq26 120 4e-22 seq62 82.4 9e-11 >seq26 Length=183063 Score = 120 bits (132), Expect = 4e-22 Identities = 337/508 (66%), Gaps = 21/508 (4%) Strand=Plus/Plus Query 130033 ACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTT 130092 ||| || ||||| || || || ||||| |||||| || |||||||| || || | ||| Sbjct 77117 ACCTTCATCACGTGAAATAAGCTCATTAGAGAAGGTCAATCCTGGCATAAGTCCTCTCTT 77176 Query 130093 CTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAA 130152 |||||||| || || | |||||| || ||||| || || || ||||| ||| || || Sbjct 77177 TTTCAACCAAAATATGGAACAAAAAGAACCAGAAAAAAATATTCCCTCTACAGCAGCAAA 77236 Query 130153 CGCAAAGAGACGCTCAGCAAAGGA-GCGGGACTTTGTATCAAACCACTTCATCGCCCACT 130211 || | | |||||||||||| || || | ||| || ||| | | ||||||| Sbjct 77237 TGCCACTAAACGCTCAGCAAAAGAGGCAGAGGATTGGAT----CCATCTTAAAGCCCACT 77292 Query 130212 GCGCCTTTTTCTCGATACACGG--GACGGTCTGGATCGCTTCAAAGAGTTCCTTCTTTTC 130269 | ||||||||||| ||||| || ||| || || |||||||| | |||||| Sbjct 77293 GAGCCTTTTTCTCAATACAAGGAATACGTTC--CATTGCTTCAAATAAACGAGCCTTTTC 77350 Query 130270 TGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTTTCGCCATGGACCATTTC 130329 | | |||| || || |||| || || ||||| ||||| ||| | |||| Sbjct 77351 TTGAGCATCTCGAATATAAGTATCGATAAGAAGAGAATAAGTTTCCGAATGAATATTTTC 77410 Query 130330 ATTATGGCA-CTGATACGCGTAGAAAGAGCGCGCTTCGCTTATCTGTACCTCATCTGCAA 130388 | || | ||| | | || ||| | || ||||| ||||| || ||| | ||| Sbjct 77411 CAT-TGCTATTTGAAATCCATAAAAACATCGTGCTTCTGGAATCTGGACATCA-CGACAA 77468 Query 130389 AATTGTTAT-TGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAAAACGCCAGGATA 130447 ||| || | | ||||| ||||||||||| ||||| ||||| || |||| | Sbjct 77469 AATCTTTCTGCAAGGTTCTCCAAAACAATTCCGTCGGAAGATGCAAAGAAAGCCA----A 77524 Query 130448 TACTT----TATGAATTTCTGTTCATTCTCGTTCAGGGTCTTCCAGTCGTCAAGATCCTT 130503 ||| | ||||| | | |||| | |||| ||||||| || || | || | Sbjct 77525 TACGTGAGAAATGAAATGGCGCTCATCTGCATTCAATTTCTTCCAATCTTCCAAGTCACT 77584 Query 130504 CGAGAGATCTACCTCCTCCGCAGTCCAA 130531 ||| | ||||| || || ||||||||| Sbjct 77585 CGATAAATCTATTTCTTCAGCAGTCCAA 77612 >seq62 Length=89227 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 || || || || || || | ||||| ||||| ||||| ||||| | ||||| ||| Sbjct 48153 CCTTCATCTCGTGATATCAACTCATTGGAGAAAGTAAGACCAGGCATCAAGCCCCGTTTC 48212 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 || ||||| || || | |||||| || ||||| ||||| ||||| || || || || Sbjct 48213 TTTAACCAAAATATGGAACAAAAAGAACCAGAAAAGAATATCCCTTCTACTGCTGCAAAG 48272 Query 130154 GCAAAGAGACGCTCAGCAAA 130173 |||| | |||||||||||| Sbjct 48273 GCAACTAAACGCTCAGCAAA 48292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618431852719480