Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F000341285.1_202013-02-25] 433 sequences; 13,712,004 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq36 517 1e-141 >seq36 Length=158315 Score = 517 bits (572), Expect = 1e-141 Identities = 740/1032 (72%), Gaps = 8/1032 (1%) Strand=Plus/Plus Query 170585 AAGGGGGTGGTTCGATGTCCTGGATGACTGGCTTAAACGTGATCGGTTTGTATTTGTGGG 170644 ||| ||||||||||| | | ||||| ||||| ||||||||||| ||||| ||| | || Sbjct 39767 AAGAGGGTGGTTCGACTTAGTTGATGATTGGCTAAAACGTGATCGATTTGTCTTTATTGG 39826 Query 170645 CTGGTCTGGACTTCTTCTTTTTCCCACTGCTTATCTTGCAATTGGCGGCTGGCTTACGGG 170704 ||||| || | || |||||||| | | ||||| || | || | |||| |||| || Sbjct 39827 ATGGTCAGGTTTGCTACTTTTTCCATGTTCATATCTAGCTCTAGGTGCCTGGTTTACAGG 39886 Query 170705 CACGACATTTGTTACAAGTTGGTACACCCACGGACTTGCAAGTTCGTACCTTGAAGGTGC 170764 || || |||||||| |||||| || || || | || ||| || | ||||| Sbjct 39887 TACAACTTTTGTTACTTCTTGGTATACGCATGGTTTAGCTTCTTCTTATTTAGAAGGATG 39946 Query 170765 TAATTTCCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCT 170824 |||||| | || || || || |||| ||||| || |||||| || || || || | Sbjct 39947 TAATTTTTTAACCGCTGCAGTATCAAGTCCTGCAAATAGTATGGGACACTC-ATTATTAT 40005 Query 170825 ACTT-TGGGGTCCTGAGTCTCAGGGGGATTTCCAACGCTGGTTACAACTTGGGGGACTCT 170883 || ||||| || || |||| || ||||| | |||| ||| |||| || || | Sbjct 40006 TTTTATGGGGACCAGAAGCTCAAGGTGATTTTACTAGATGGTGTCAAATTGGAGGTCTTT 40065 Query 170884 GGAATTTTGTGGCGCTCCACGGAGCCTTTGCTCTCATAGGTTTCATGCTT-CGGCAGTTT 170942 ||| |||| || | || || || ||||| | |||||||| || || || || ||| Sbjct 40066 GGACTTTTACTGCTTTACATGGTGCTTTTGCCTTGATAGGTTT-TTGTTTGCGTCAATTT 40124 Query 170943 GAAATCAGTC-GTCTCGTAGGGATTAGACCGTACAATGCAATCGCTTTCTCTGGTCCTAT 171001 ||||| || | | | || || ||||| || ||||||||||| ||||| || || || || Sbjct 40125 GAAAT-AGCCAGATTAGTCGGAATTAGGCCATACAATGCAATAGCTTTTTCAGGACCAAT 40183 Query 171002 CGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCTCTTGGGCAGTCAAGTTGGTTCTTCGC 171061 || || ||||| || || || || ||||| |||||||| | |||||||| || || Sbjct 40184 TGCAGTTTTTGTTTCAGTATTTCTTATTTATCCACTTGGGCAAGCTAGTTGGTTTTTTGC 40243 Query 171062 ACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTCCTGCTCTTCCTGCAAGGTTTCCACAA 171121 ||| |||||||||||||| ||||| || || | | || | ||||||||||| || Sbjct 40244 TCCTAGTTTTGGAGTTGCAGCTATCTTTCGATTTATTTTATTTTTACAAGGTTTCCATAA 40303 Query 171122 CTGGACACTGAATCCATTTCATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCT 171181 ||||| | |||||||||||||||||||||||||| || || ||||| || ||||| || Sbjct 40304 TTGGACTTTAAATCCATTTCATATGATGGGTGTTGCTGGAATACTCGGAGGAGCATTACT 40363 Query 171182 TTCTGCAATTCATGGTGTTACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAA 171241 || ||| |||||||| | || ||||||||||| || | |||||||| || || || Sbjct 40364 TTGTGCTATTCATGGAGCGACTGTAGAGAATACATTATTCGAAGATGGCGAAGCTGCTAA 40423 Query 171242 CACCTTTAAGGCATTTGACA-CGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTA 171300 | |||| ||| ||| ||| | || || || || || ||||| ||||| || |||| Sbjct 40424 TA-CTTTCAGGGCTTTTACACCAACACAATCAGAGGAAACTTATTCAATGGTTACGGCTA 40482 Query 171301 ATCGTTTCTGGTCGCAGATTTTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCT 171360 ||||||| ||||| || ||||||||| | || || || || | ||| | ||||| | Sbjct 40483 ATCGTTTTTGGTCACAAATTTTTGGTGTTGCATTTTCTAACAAAAGATGGCTACATTTTT 40542 Query 171361 TTATGCTGTTTGTTCCTGTCATGGGTCTTTGGGTCAGTAGTCTGGGGATTATTGGTCTTG 171420 ||||||| ||||| || || | || | ||| || | | || || || || |||| Sbjct 40543 TTATGCTATTTGTGCCAGTTACAGGATTATGGACAAGCTCTATTGGTATCATAGGACTTG 40602 Query 171421 CTCTTAATCTTAGGGCTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAG 171480 | | ||| | | || |||||||| || ||| || | | || ||||| || |||| Sbjct 40603 CATTAAATTTACGTGCATATGATTTTGTCTCTCAAGAATTACGTGCCGCAGAGGACCCAG 40662 Query 171481 AGTTCGAGACGTTCTATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGG 171540 | || ||||| || ||||| || || | || | ||||||||| | | |||||||||| Sbjct 40663 AATTTGAGACTTTTTATACTAAAAATTTACTTCTAAATGAAGGTATAAGAGCATGGATGG 40722 Query 171541 CACCAGTAGACCAACCACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCA 171600 || || ||| |||||||||||||| ||||| ||||||||||| ||| |||| ||||| | Sbjct 40723 CAACACAAGATCAACCACATGAAAATTTTGTATTCCCAGAGGAGGTTTTACCACGTGGAA 40782 Query 171601 ATGCACTTTGAT 171612 |||| |||| || Sbjct 40783 ATGCCCTTTAAT 40794 Score = 444 bits (492), Expect = 7e-120 Identities = 690/986 (70%), Gaps = 0/986 (0%) Strand=Plus/Minus Query 169343 TGGGAACAATTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTC 169402 ||||||| || ||| ||| | || ||| || || ||||| || | |||||||| Sbjct 27774 TGGGAACGTTTTTGTTCTTGGATTACTAGCACAGAAAATCGTCTCTACATAGGTTGGTTT 27715 Query 169403 GGCGTCCTGATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATC 169462 || || | |||||||| | || |||| || || || || || | || || Sbjct 27714 GGAGTATTAATGATCCCTACATTACTAACAGCTACATCTGTATTTATAATTGGATTTATA 27655 Query 169463 GGTGCTCCCCCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTAT 169522 | |||||| || || || || ||||| || | ||||| ||| | || || || | ||| Sbjct 27654 GCTGCTCCACCAGTTGATATAGACGGTATTAGAGAACCAGTTTCAGGATCATTGTTATAT 27595 Query 169523 GGTAACAACATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTC 169582 || || || || || |||||||| |||| || | || || ||||| || | || ||| Sbjct 27594 GGAAATAATATTATAACTGGTGCTATTGTACCTACATCTAATGCAATAGGAATACATTTC 27535 Query 169583 TATCCCATCTGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAA 169642 ||||| || |||||||||||| | | ||||||||| | || || || ||||||| || Sbjct 27534 TATCCTATTTGGGAAGCAGCATCTTTAGATGAATGGCTATATAATGGCGGTCCTTATGAA 27475 Query 169643 CTGGTTGTCTTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTG 169702 | | || || |||||| | || || || | ||| || ||||| ||||| |||||||| Sbjct 27474 TTAATAGTTTTGCACTTCTTTATTGGAATTTGTGCATATATGGGACGTGAATGGGAATTA 27415 Query 169703 TCCTATCGTCTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCA 169762 ||||||||| || ||||| |||||||| || |||| ||| ||||| ||||| ||| Sbjct 27414 AGCTATCGTCTTGGAATGCGTCCTTGGATAGCCGTAGCTTTCTCAGCTCCTGTTGCTGCA 27355 Query 169763 GCCTCCGCTGTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCT 169822 ||| | ||||| || | |||| || |||| ||||| || || || | |||||| Sbjct 27354 GCCACAGCTGTATTTATTATCTATCCTATTGGACAAGGTAGTTTTTCAGATGGTATGCCA 27295 Query 169823 CTGGGTATCTCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTC 169882 | ||||| || || || ||||| | ||| | || ||||||||||| || || || | Sbjct 27294 TTAGGTATTTCTGGTACTTTTAATTTTATGTTAGTTTTCCAAGCTGAACATAATATTTTA 27235 Query 169883 ATGCACCCCTTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCG 169942 ||||| || || || ||| | |||||||| || || ||||| || || | ||||| || Sbjct 27234 ATGCATCCGTTTCATATGATGGGTGTTGCTGGTGTATTTGGAGGTTCATTATTTAGTGCA 27175 Query 169943 ATGCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAG 170002 |||||||| || || ||||| ||| | | |||||||| || ||||| ||||| Sbjct 27174 ATGCACGGCTCTCTTGTAACTTCAAGTTTGATACGTGAAACAACAGAGAATGAGTCTGCA 27115 Query 170003 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGT 170062 ||| ||||||| || || || |||||| | || || || ||||||||||| ||||| ||| Sbjct 27114 AACAATGGTTATAAATTTGGCCAAGAATATGAAACTTATAACATCGTTGCTGCTCATGGT 27055 Query 170063 TACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTC 170122 || || || | | || |||||||| || ||| || || || || ||| | || ||| Sbjct 27054 TATTTTGGAAGATTAATTTTCCAATATGCAAGCTTTAATAATTCACGCTCATTACATTTC 26995 Query 170123 TTCCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATG 170182 ||| | || |||||| || || | || ||| |||| || | ||| || ||| ||| Sbjct 26994 TTCTTAGCTTTATGGCCAGTAGTATGTATTTGGCTCACATCTTTAGGTATCAGCACAATG 26935 Query 170183 GCGTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTG 170242 || || ||| | || || || || || || || || | | ||| ||| || | || Sbjct 26934 GCATTTAACTTAAATGGATTTAATTTTAATCAATCTGTTGTTGATTCTCAAGGAAGAGTA 26875 Query 170243 CTCAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAG 170302 | || || ||||| || || | || ||||| | | || || ||||| ||||| || Sbjct 26874 ATTAATACTTGGGCTGATATTTTAAATCGTGCAAATTTAGGAATAGAAGTAATGCATGAA 26815 Query 170303 CGTAATGCTCACAACTTCCCTCTCGA 170328 |||||||| || ||||| ||||| || Sbjct 26814 CGTAATGCACATAACTTTCCTCTAGA 26789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592195194726160