Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq103 95.1 1e-14 >seq103 Length=203287 Score = 95.1 bits (104), Expect = 1e-14 Identities = 167/237 (70%), Gaps = 10/237 (4%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||| | ||| | ||| || || || | || ||||| ||||| || || || || | Sbjct 14160 CCTCCCCTTAACCTCAATACCAAGTGCAACGTGGATTCCTTTTGAATATTATAGTCCGAC 14219 Query 143018 ATTGTGCTCGAGTCTTCGAGTTG--TTTACCAGCATAGATCAGACGTTGCTGATCGGGAG 143075 | || || |||||||||||| ||| |||||| | || || | ||| ||||| || | Sbjct 14220 AGAGTTCTTCCGTCTTCGAGTTGCATTTCCCAGCAAATATAAGCCTTTGTTGATCAGGGG 14279 Query 143076 GTATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGC-TGTTCCACCGTGTCCGTGGGTTCT 143134 |||| |||||||| || || | |||| ||| | | ||| | || |||| ||||| Sbjct 14280 GTATACCTTCTTTATCTTGAAATCTTTGATTTCACATTTTCTATAGTATCCGAAGGTTCG 14339 Query 143135 ACTTC-AAC---AGTC--ACCG-TCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 || || ||| || | || | |||| || ||||| ||||| || ||||||||||| Sbjct 14340 ACCTCTAACGTTAGGCTTACTGGTCTTTCCTGTCAACGTTTTCACAAATATTTGCAT 14396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 507013658491440