Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq17 104 4e-17 >seq17 Length=139726 Score = 104 bits (114), Expect = 4e-17 Identities = 119/158 (75%), Gaps = 3/158 (2%) Strand=Plus/Plus Query 207601 ATCAATATATACTAGAAGCAGCCGAAGATGCTGGTCTAGATATGCCTTCTTCTTGTAGAG 207660 ||||||||||| |||| ||||| ||||| || ||||| | || | ||||||||||| Sbjct 56914 ATCAATATATATTAGATGCAGCTGAAGAACAAGGATTAGATCTCCCCTATTCTTGTAGAG 56973 Query 207661 CAGG--AGCTTGTTCTGCTTGTTTAGGAAAAGTATTAGAAGGATCAGTTAATAATGAAGA 207718 |||| ||| |||||| |||| ||| ||| | ||||||||| ||| || | || Sbjct 56974 CAGGGAAGCATGTTCTACTTGCGCAGGCAAACTCTTAGAAGGAGAAGTAGATCAATCTGA 57033 Query 207719 ACAATCATTCTTAGATGATGATCAATTAGAAGAAGGAT 207756 || || || ||||||||||||||| || ||| ||||| Sbjct 57034 TCAGTCCTT-TTAGATGATGATCAAGTAAAAGCAGGAT 57070 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807554018950520