Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq89 95.1 2e-14 >seq89 Length=114172 Score = 95.1 bits (104), Expect = 2e-14 Identities = 292/440 (66%), Gaps = 14/440 (3%) Strand=Plus/Minus Query 42424 TGGCCTTCTTCGCCGCCTCTG--ACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCAT 42481 |||| ||||| || || || | | ||||| || ||||| ||| |||| | | |||| Sbjct 97395 TGGCTTTCTTTGCTGCTTCGGGTATGGCATCGTGAATGAAAACTTGGCAGCTCGTTTCAG 97336 Query 42482 GAAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAA 42541 | || || || | || ||||| || || || ||||| || | || || || || Sbjct 97335 CACCGAAGTACAAGTCCCCGAAGCGCGTTGTTTTTATGGCTTTCAACTGGCGATGGAAAA 97276 Query 42542 CGTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCG 42601 || ||||| || |||| || ||| | ||||||| || | || ||||| Sbjct 97275 TGTACACTCGGAAATGTATGCGTTGCTGATAGACACGTATATTCGAGAGGT-GTCGAAGA 97217 Query 42602 TAA-CG--GGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTG 42658 || || | |||||| ||||| || | | |||||| | || ||||||||||| || Sbjct 97216 AAAGCGTCGACTGTTCTTTGCCATTGAAAACCTTCCCTGCGTGAA-AAGAAGGCGGATTG 97158 Query 42659 GGCGCTCAACTGGA-TCGAGAGTCCCGACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTA 42717 | || | || |||| ||||| || | | | || | |||| | ||||| || ||| Sbjct 97157 GTCGTTGAAATGGATTCGAGTGTTCTCA---TAGTTTTGCCGAGCGTCTGGTTGCTTTTG 97101 Query 42718 CCGCCGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAGA 42777 | || ||||| || || ||||| || || | || | ||||| || ||| | ||| | Sbjct 97100 CAGCGGTCGAAGGGATATTCTTTTCTGGTTCTTTTG-TTCCATATTTTGGTTGAAGAAAC 97042 Query 42778 AGGTGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCA-GGGACGAGGGGCTG 42836 || || |||||| ||||| ||||| || || || | || | || | || || || || Sbjct 97041 GGGGGTTGATGCCTGGACTGACCTTTTCCAATGAGTTGAT-ATCACGAGATGAAGGCTTG 96983 Query 42837 CATAGGGACTTTGCCTGCCT 42856 ||| | || ||||| ||||| Sbjct 96982 CATTGTGAATTTGCTTGCCT 96963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944337818903920