Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq79 89.7 1e-12 >seq79 Length=138238 Score = 89.7 bits (98), Expect = 1e-12 Identities = 190/282 (67%), Gaps = 4/282 (1%) Strand=Plus/Plus Query 322003 GTACTCGAAGGGGGCTCGATTCACGTCGATGGCGAAGGGACGCTTATAACGACAAAAGAA 322062 || || ||||| || |||||| || ||||| ||||| || ||| | |||||| ||||| Sbjct 24009 GTCCTGGAAGGAGGGTCGATTTCAGTAGATGGGGAAGGAACTCTTGTTACGACAGAAGAA 24068 Query 322063 TGTCTATTGTCCGCCGGCAGGAACCCCACC-ATGAGCCAACAAGATATTGAATATTATCT 322121 ||| ||||| | || ||||| | ||| | || | ||||||||| || | Sbjct 24069 TGTTTATTGAATCCAAATAGAAACCCATCGGATGTCCAAAGAGGATATTGAAAATCGGTT 24128 Query 322122 CAAAGAATACCTTAATGTCGAGAAAATCATCTGGCTAGAATATGGTGT---TGCAAATGA 322178 ||||||| |||| | ||||| || | ||| | ||||| || || |||| Sbjct 24129 AAAAGAATTCCTTGGAATTAAGAAAGTCGTTTGGTTGCCTTATGGAGTCTATGGTGATGA 24188 Query 322179 CGAAACAAATGGGCATGTTGATAACATGGCTTGTTTTTCACGACCCGGTGAAGTTATCCT 322238 || || ||||| ||||||||||||||| | ||| | | ||| || ||| | | Sbjct 24189 TGACACCAATGGACATGTTGATAACATGTGTCAATTTACTCAACCTGGAACTGTTGTATT 24248 Query 322239 GGCATGGACCGATGATCCTAAACATCCCCAATATGAACGTTC 322280 | ||||| |||||||| | | || || ||||||||||| Sbjct 24249 GCATTGGACAGATGATCCAAGGGACCCTCAGTATGAACGTTC 24290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102878346713950