Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq74 84.2 2e-11 >seq74 Length=163707 Score = 84.2 bits (92), Expect = 2e-11 Identities = 200/301 (66%), Gaps = 1/301 (0%) Strand=Plus/Minus Query 94069 TCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGT-CCCTATGCTCCGGGTCTT 94127 || || || || ||||||||||| || ||||| ||| | || ||||||||| || || || Sbjct 151993 TCGTATATTCGAGGTACCAATGGAACTTCCAATGGCATTGTTCCCTATGCTTCGAGTATT 151934 Query 94128 CAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGT 94187 || | | ||| | || || || || || || || | ||| || || |||| || | Sbjct 151933 TAATGATACTGCGAGATATGTCGATCAAGGAGGAGGAAAGAGAAAAGGAGCTTTTGCTAT 151874 Query 94188 CTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGG 94247 ||| | ||||| ||||| || ||| | || | || || ||||||| || || Sbjct 151873 TTATTTGGAGCCTTGGCATGCCGACCATTTTGAGTTTTTAGATTTGAGAAAGAATCATGG 151814 Query 94248 CAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTAT 94307 || || | | | || |||| | || || | | | ||||| || || | ||||| Sbjct 151813 AAAGGAAGAGAATCGAGCACGAGATTTATTTTATGGTTTATGGGTTCCCGATTTGTTTAT 151754 Query 94308 GAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACT 94367 ||| || || || | | | |||||| | ||||||||||||||| ||| ||| | Sbjct 151753 GAAGCGAGTAGAAAGAGATGAAAAGTGGAGTTTATTTTGTCCCAATGAAGCTCCAGGATT 151694 Query 94368 G 94368 | Sbjct 151693 G 151693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722476467320