Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq36 87.8 2e-12 >seq36 Length=139094 Score = 87.8 bits (96), Expect = 2e-12 Identities = 165/236 (70%), Gaps = 10/236 (4%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| | || ||||| ||||| || | |||||||| ||||||||||| || || Sbjct 92195 TCCACC-CTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTTTGAATATTATAGTCTGA 92253 Query 126946 CATCGTGCGAGAATCGTCT-AGCTGTTTTCCAGCGTAGATC-AATCGCTGCTGATCGGGA 127003 | || ||| ||| ||| || || |||||||| | ||| || || ||||| || ||| Sbjct 92254 AAGAGTACGACCATCTTCTAAGTTGCTTTCCAGCAAATATCAAAACGTTGCTGGTCTGGA 92313 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTC 127062 || || || |||||||| || || ||||| || || | || || | | ||| Sbjct 92314 GGAATTCCTTCCTTGTCTTGTATCTTGGACTTGACATTTCTCAATAGTATCTGAAGGCTC 92373 Query 127063 GACTTCGACGGT-----CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||||| | || || ||| |||||||| || || |||||||| |||||||| Sbjct 92374 CACTTCAAGAGTTGAAGCA-CGTCTTGCCGGTAAGTGTCTTTACAAATATCTGCAT 92428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475500104580080