Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq51 215 4e-50 seq64 212 5e-49 seq17 159 3e-33 seq40 116 3e-20 seq85 98.7 8e-15 seq103 95.1 1e-13 >seq51 Length=79067 Score = 215 bits (238), Expect = 4e-50 Identities = 387/556 (70%), Gaps = 7/556 (1%) Strand=Plus/Minus Query 552024 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAA-CCAGTAGAACAAGTTTT 552082 |||||||| | ||||||||| || ||||| ||| ||||| ||||| || | ||| | Sbjct 17795 TTTGAAGAGCTCAATTCTGATCTTTTCAGAAAGACATTTGAAACCAGTTGAGAAGGTTCT 17736 Query 552083 AAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTAC 552142 |||| | | || | || || |||| |||||||||| || ||||| || || || Sbjct 17735 TCAAGATGCTGATATGAAAAAGTCAGAAGTCGATGAAATTGTCCTAGTTGGAGGTTCCAC 17676 Query 552143 AAGAATTCCTAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATG 552201 | || || || | | ||| | || ||| ||| ||||||||| || | || | Sbjct 17675 GCGTATACCCAAGGTACAAGAACTTTTGAAGGACTT-TTTCAATGGGAAGGAGTTGCACA 17617 Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTC-TT 552260 ||| | | ||||| ||||||||||| || |||||||| || | || | || || | || Sbjct 17616 AAA-TATCAATCCTGATGAGGCTGTGGCATATGGTGCTGCTGTGCAGGGAGGAATCCCTT 17558 Query 552261 TCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCT 552320 ||||| || | |||| || | || |||| |||||| | ||||| ||||| | || Sbjct 17557 TCTGGTGAAGGCGGTGAACAAACAAAAGATATGGTACTTCTTGATGTGACTCCGTTGTCC 17498 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACT-AT 552379 | ||| ||||||| |||||||| | ||||| || || ||| | || ||| | | | || Sbjct 17497 TTGGGTATAGAAACCGTTGGAGGAGTAATGACGAAACTCATCAAGAGGAATTCCAGTGAT 17438 Query 552380 TCCTTGTAA-AAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAA 552438 |||| || |||| | | |||||| | || ||| ||||| ||| | || | Sbjct 17437 TCCTACGAAGAAAACCCCAAGTATTTACGACATATCAGGATAACCAAGAGGTCGTCCTCA 17378 Query 552439 TTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTA 552498 ||||| | |||||||||||| | | || ||||||||| ||| || || | || Sbjct 17377 TTCAAGTATTTGAAGGAGAACGGGCCATGACCAAAGATAATCATCTTCTAGGCAAATTCG 17318 Query 552499 ATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATA 552558 | || |||| || ||||| |||||||| ||| |||| |||||||| |||||||| || | Sbjct 17317 AGTTGAAAGGGATACCTCCAGCTCCTCGAGGAATACCCCAAATTGAGGTTACTTTTGAAA 17258 Query 552559 TCGATGCCAATGGAAT 552574 | ||| ||||||| || Sbjct 17257 TAGATTCCAATGGTAT 17242 Score = 170 bits (188), Expect = 2e-36 Identities = 379/555 (68%), Gaps = 19/555 (3%) Strand=Plus/Minus Query 549995 ATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAA--TGGTAAAG 550052 || || |||||||| ||||| || ||| |||||| |||||| |||||| ||| || | Sbjct 18685 ATTGGCATAGATTTGGGAACTACCTATTCTTGTGTCGGTGTTATGCAAAAGCTGGCAAGG 18626 Query 550053 TTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGG 550112 | |||||||| || || || | || ||||||| || || || || ||||| || || Sbjct 18625 TCGAAATTATCGCAAACGAACTGGGGAACAGAATAACACCTTCCTACGTTTCCTTTACTC 18566 Query 550113 AAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATA 550172 | ||| | ||||| || || || || ||||||| || || || || |||| Sbjct 18565 CAGAGGAAAGACTCGTTGGAGACGCTGCCAAGAATCAAGCTCCTTTGAACCCAACGAATA 18506 Query 550173 CTATTTTTGATGCTAAACGTTTAATT-GGAAGAAGTTTTAATGATTCGACTGTTCAGGCA 550231 | ||| ||| | || | || || ||| |||| ||| | || | || || ||| | Sbjct 18505 CCGTTTATGACGTAAAGAGATTCATCCGGACGAAGATTTGACGAACCAACCGTGCAGAGA 18446 Query 550232 GATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCT 550291 || | ||||| || | | ||||||| || |||||||||||||||| ||| | Sbjct 18445 GACAAGAAGCTACTACCGTACGAAATTGTGAACAAGGATGGAAAACCTTATATTCAAG-T 18387 Query 550292 ACTCATGAA-GGATCTGTTAAACAA--TTTTCAC--CAGAACAAATTTCATCTATGGTTT 550346 || || ||| ||| || ||||| | | || |||| || | |||||| Sbjct 18386 GGAGATAAAAGGAGA----AAAGAAGCTTTTCGCTCCCGAGGAAATATCGGCGATGGTTC 18331 Query 550347 TAATGAAAATGAAACAAA-CAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTA 550405 | ||||||||| | ||| || | ||| |||| ||||||| | |||| || Sbjct 18330 TTGGAAAAATGAAAAGATGCAG--AG-GAGTTTCTTGGAAAAGAAGTCAAAAATGCTGTG 18274 Query 550406 AT-AACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 | |||||| |||||||| ||||||||| | |||||||| || || || || ||||| Sbjct 18273 GTTAACTGTTCCAGCATACTTTAATGACGCTCAACGTCAGGCAACAAAGGACGCTGGCAC 18214 Query 550465 TATT-GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCAT 550523 || ||||| | ||||| | ||||| |||||||||||||||||||| || |||| | Sbjct 18213 CATCCGCTGGTTTGAATGTCTTACGTATCATCAATGAACCTACTGCTGCAGCTATTGCTT 18154 Query 550524 ATGGACTTGATAAAC 550538 |||| | ||||||| Sbjct 18153 ATGGCTTGGATAAAC 18139 Score = 100 bits (110), Expect = 2e-15 Identities = 120/163 (74%), Gaps = 0/163 (0%) Strand=Plus/Minus Query 394006 TGTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATT 394065 ||| || | |||| | ||||||| ||||| |||||| ||| || | || ||||||| Sbjct 59579 TGTAACCACTTCAGGATATGTTAAGTTCATGGCAATACTTTTAGGAACACCAACTTCATC 59520 Query 394066 AAGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCC 394125 | | |||||| ||||| | |||||||| || | | || | || || |||||||| Sbjct 59519 CAAACGAATATTCGGATCTGGAGTAATAACAGTTCTTGCAGAAAAGTCGACTCGTTTTCC 59460 Query 394126 CATAAGATTTCCACGAATTCTACCTTCTTTACCTCGTAATCGT 394168 ||| | |||||| |||||||| ||||| || ||| ||||||| Sbjct 59459 CATCAAATTTCCTCGAATTCTTCCTTCCTTTCCTTTTAATCGT 59417 >seq64 Length=48223 Score = 212 bits (234), Expect = 5e-49 Identities = 467/686 (68%), Gaps = 13/686 (2%) Strand=Plus/Minus Query 551911 GAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAG 551970 |||| || || || ||||| || | |||||||| || |||||||| || ||||||| Sbjct 28775 GAACGGCATGTGAGAGAGCAAAGAGGACTCTTTCAAGTGCCACTCAAACTACGATTGAAG 28716 Query 551971 TAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAG 552030 | ||||| || | ||| || || || | | || | ||| | || || || ||||| | Sbjct 28715 TCGATTCTTTGTATGAAGGTATCGACTTCTACACCCGAATTACCAGAGCGAAGTTTGAGG 28656 Query 552031 ATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTT-TTAAGAGAT 552089 | | || || | || | ||| || || || || || |||| ||||| || Sbjct 28655 ACTTGTGCATGGACTTGTTCCGGAAATGCATAGACCCCGTGGAGAGAGTTCTTAAG-GAC 28597 Query 552090 TCAAAGATTGATAAATCCAAAG-TACATGAAATTGTGCTTGTTGGTGGATCTACAAGAAT 552148 || ||||| || || | ||||| ||||||| ||||| || || || | || Sbjct 28596 TCTG-GATTGTCCAAGAGTCAGATTCATGATGTTGTGCTAGTTGGAGGCTCAACTCGTAT 28538 Query 552149 TCCTAAAATTCGCGAAATGTT--AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 ||| || ||| | || | ||| ||| |||||| || || || | | ||| Sbjct 28537 TCCAAAGGTTCAGCAGCTGCTGCAAGA-CTT-TTTCAACGGCAAGGAACTCTGCAAGAGT 28480 Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 ||||||| |||||||| |||||||||||||| ||| |||| || |||||| | |||| Sbjct 28479 ATTAATCCTGATGAGGCAGTTGCCTATGGTGCGGCAGTTCAGGCTGCTATTTTGACTGGT 28420 Query 552267 CAAACTGATGAAAA-ACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGG 552325 | | ||| || || | | || || | | | ||||| || || | | | || Sbjct 28419 GATGCCAGTGAGAAGACGA-AGGATCTTTTGTTATTGGATGTGACACCCTTGAGTTTGGG 28361 Query 552326 TTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTG 552385 | | ||||| | |||||| | ||||| || |||||||| ||||| || ||||||||| Sbjct 28360 TATCGAAACTGCAGGAGGTGTAATGACAAAACTTATCGAGAGAAACACGACTATTCCTAC 28301 Query 552386 TAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 | ||||| | |||| |||||||| | |||||||| ||||||| || |||||| | Sbjct 28300 GAGGAAATCACAGATATTCACTACGTATGCCGATAATCAGCCTGCTGTGACTATTCAAGT 28241 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGA 552505 | |||||| ||| | | || ||||| ||||| | ||| |||| | || Sbjct 28240 ATATGAAGGTGAACGTGCGATGACGAAAGACAATAACTTGTTGGGTCGTTTTGACTTGAC 28181 Query 552506 AGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTAC--TTTCGATATCGAT 552563 ||| ||||||||| ||||| |||||||| || ||||| ||||| ||| |||| ||| Sbjct 28180 AGGAATTCCTCCTATGCCTCGAGGAGTACCTCAGATTGAGGTTACGTTTTGAATATTGAT 28121 Query 552564 GCCAATGGAATTTTGAATGTGACTGC 552589 |||||||| | ||||||||||| ||| Sbjct 28120 GCCAATGGTA-TTTGAATGTGAGTGC 28096 Score = 131 bits (144), Expect = 1e-24 Identities = 372/563 (66%), Gaps = 19/563 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| || || ||||| || || |||||| || || ||| || | | Sbjct 29568 AGCTGTTGGTATTGACTTGGGAACAACTTACTCTTGTGTAGGAGTATGGATGAACGAAAG 29509 Query 550051 AGTTGAAATTATTGCCAA----TGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTT 550106 ||||||||| ||| | | | | || || ||||| || ||||| || ||||| ||| Sbjct 29508 AGTTGAAATAATTCCTAGCAGCTTAACAGGGGAACAGGACGACTCCTTCCTATGTGGCTT 29449 Query 550107 TCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTA 550166 |||| || || | ||| |||| || ||||| || | || | | || ||| Sbjct 29448 TCACTGACGAGGAGCGCTTAATTGGAGACGCAGCCAAGAACCAGGTTGCCTTGAACCCTC 29389 Query 550167 CCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTC 550226 |||||| | ||||| || || || | ||||| ||| ||| |||| | | || | Sbjct 29388 AAAATACTGTATTTGACGCAAAGCGCCTTATTGGTCGAAAGTTTTCTGATCCTTCGGTGC 29329 Query 550227 AGGCAGATATGAAGCA--TTGGCCTTTCCAA---ATTGTTAATGTTTCTGGAAAACCTTA 550281 | ||||||||||| || | |||| ||| || |||| || | | | ||||| | Sbjct 29328 AAGCAGATATGAAACAGGTCGGCCCTTCAAAGTAATTGCCAAGGATGGAGATAAACCCCA 29269 Query 550282 TATTGAAGCTACTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTA 550340 ||| || || || ||||| | ||| | |||| | || ||| | ||||| | | Sbjct 29268 TATACAATTAACCTATAAAGGAGA-GACAAAGACTTTTGCCCCTGAAGAGATTTCTGC-A 29211 Query 550341 TGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATG 550400 ||||| | ||| |||| ||||||| || | | ||||| | || || || | Sbjct 29210 TGGTTCTGCAGAAGCTGAAGGAAACAGCGGAGGCGTATCTTGGTTCTGCTGTAACTGAAG 29151 Query 550401 CAGT----AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAG-- 550454 | || | | ||||| || || ||||| |||||||||||||| || || || || | Sbjct 29150 CTGTCGACACTCACTGTCCCTGCGTATTTCAATGACTCACAACGACAGGCGACAAAGGGT 29091 Query 550455 ATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTG 550514 |||| || ||| || || | ||||| ||||| ||||| ||||| |||||||| || | Sbjct 29090 ATGCAGGTGCTATAGCCGGCTTGAATGTGCTTCGAATTATTAATGAGCCTACTGCAGCCG 29031 Query 550515 CACTTGCATATGGACTT-GATAA 550536 | |||| || || || ||||| Sbjct 29030 CTATTGCGTACGGTTTTGGATAA 29008 >seq17 Length=139726 Score = 159 bits (176), Expect = 3e-33 Identities = 394/582 (68%), Gaps = 48/582 (8%) Strand=Plus/Plus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGA-----ACCAG 552069 || || ||||||||||| | ||||||||| | || ||| ||| ||||| Sbjct 72954 AGAGCTAAATTTGAAGAATTATGTTCTGATTT-----GATAAATCGTTGTCGGATACCAG 73008 Query 552070 TAGAACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAA-TTGTGCTT 552128 ||||| | ||||| ||| |||| ||||| | | ||| || ||| || |||| ||| Sbjct 73009 TAGAAACTGCTTTAAAAGACGCAAAACTTGATGCAACTAAAATAAATGGAAGTTGTTCTT 73068 Query 552129 GTTGGTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTA---TTTCAAT 552185 || || || || ||||||||||| ||| ||| | ||||| | | | | Sbjct 73069 GTCGGAGGTTCAACAAGAATTCCGGCTATT----AAACAATTAGTTCAAAAGCTGTTA-- 73122 Query 552186 GGTAAAAAATTAAATGAAAG-TGTTAATCCAGATGAGGCTGTTGCCTAT--GGTGCCGCA 552242 |||||| | |||| |||| ||||||||||||||| | ||| || ||| ||||| || Sbjct 73123 GGTAAAGTACCAAATCAAAGGTGTTAATCCAGATGAAGTTGTAGC-TATTGGGTGCAGCT 73181 Query 552243 ATTCAAGCAGCTATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTA 552302 |||| || | | | || | ||| |||| ||| ||| | ||| || Sbjct 73182 GTTCAGGCCGGTGTGCTAGCG-------CTGGTGAAGTG-----AAAGATT-TGCTTTTA 73228 Query 552303 ---GATGTTACTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTT 552359 |||||||||||||| |||| || ||||||| | || || |||||||||| Sbjct 73229 TTGGATGTTACTCCTCT--CTCTAGGAGTAGAAACTTTAGGTGGCGTTATGACTAAAAGC 73286 Query 552360 A--TCGATAGAAATACTACTATTCCTTGTAAAAAATCTCGTG-TATTTTCTAC-GTATTC 552415 | || | | ||||| || ||||| || ||||| | | ||||| || | | | Sbjct 73287 AATTCCAC-GTAATACAACAATTCCAACCAAGAAATCCAGAAATTTTTTCAACAGCAAT- 73344 Query 552416 AGATAATCAAACTGCTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGA 552475 |||||||||| || |||| |||||| |||| |||| |||||| |||| | ||||| Sbjct 73345 AGATAATCAACCTAATGTTGAAATTCATGTTTTACAAGGTGAAAGAGAATTAGCAAAAGA 73404 Query 552476 TAATAATCAACTTGGTACTTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACC 552535 |||||| | || |||||| ||||| || || ||||||| || | || || || Sbjct 73405 TAATAAGAGTTTAGGAACTTTTCGCTTAGATGGAATAGCTCCTGCACCAAGAGGCGTGCC 73464 Query 552536 GCAAATTGAAGTTACTTTCGATATCGATGCCAATGGAATTTT 552577 |||||||||||||| || ||||| ||||| ||||||||||| Sbjct 73465 TCAAATTGAAGTTACATTTGATATTGATGCTAATGGAATTTT 73506 Score = 141 bits (156), Expect = 7e-28 Identities = 164/215 (76%), Gaps = 11/215 (5%) Strand=Plus/Plus Query 550309 TAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAA--TGA--AACAAA 550364 |||||||||| |||||||| |||||||| | || |||| ||||| || || | Sbjct 72387 TAAACAATTTGCACCAGAAGAAATTTCAGCGCAAGTATTAA-GAAAACTTGCCGAAGATG 72445 Query 550365 CA-GCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATAT 550423 || | |||| ||| || ||| ||||||| | |||||||| ||||| ||||| ||| Sbjct 72446 CAAGTCAGTACTTA----GGCCAA-AAGTTACTCAAGCAGTAATCACTGTTCCAGCTTAT 72500 Query 550424 TTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTT 550483 |||||||| ||||| ||||||||||| |||||||| || ||||| || || | || Sbjct 72501 TTTAATGATTCACAGCGTCAAGCTACCAAAGATGCGGGTAAAATTGCAGGGCTGGAAGTA 72560 Query 550484 CTTCGTATTATCAATGAACCTACTGCTGCTGCACT 550518 || |||||||| ||||||||||| |||||| |||| Sbjct 72561 CTACGTATTATTAATGAACCTACAGCTGCTTCACT 72595 Score = 91.5 bits (100), Expect = 1e-12 Identities = 151/213 (71%), Gaps = 20/213 (9%) Strand=Plus/Minus Query 361626 AAACATCGAGTGTTCCTGCACCTAAATCATATATGATAATATTCCCCCCGTTT--TTATT 361683 ||||||| | ||||| ||||||||||| ||| ||||||| |||| ||| | Sbjct 72670 AAACATCAAAAGTTCCACCACCTAAATCAAATAC--TAATATT------GTTTCATTACT 72619 Query 361684 TTTCCAAGTTTTACTTCCAAGACCATAAGC-TAATGAAGCAGCTGTTGGTTCGTTAATTA 361742 |||| ||| || || |||| | | || |||||||||||| ||||| ||||| | Sbjct 72618 TTTC------TTA--TCTAA-ACCAGCACCCTAGTGAAGCAGCTGTAGGTTCATTAATAA 72568 Query 361743 TTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCAT 361802 | | || | || || || ||||| |||||| || |||||||| |||| || Sbjct 72567 TACGTAGTACTTCCAGCCCTGCAATTTTACCCGCATCTTTGGTAGCTTGACGCTGTGAAT 72508 Query 361803 CATTAAAATATGCAGGAACAGTAATCACTGCTT 361835 |||||||||| || |||||||| || ||||||| Sbjct 72507 CATTAAAATAAGCTGGAACAGTGATTACTGCTT 72475 >seq40 Length=209414 Score = 116 bits (128), Expect = 3e-20 Identities = 201/292 (69%), Gaps = 0/292 (0%) Strand=Plus/Plus Query 344249 AATGGGTTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATA 344308 |||| ||||||| | ||||| ||||| || ||||| ||||| || || ||||| |||| Sbjct 2727 AATGTATTTTATCATCGACCATATGTTTTAGTCGTTGGTAATAAGTAGGTCCAATAAATA 2786 Query 344309 TTTTAACTTCCATTCTTTGTCCCGTCATTCCATTATACATTGTTTCATTTCCCCATGCTT 344368 | | |||||| | | || |||| |||||||||||| ||| ||| | || Sbjct 2787 TATGCGCTTCCAACGGTCGACCTGTCAATCCATTATACATAAGTTCCCATCCACGACTTT 2846 Query 344369 CATGTCCTAAAGCTACTAAATCATCATTAATTTTATTAATATTAACTCCTGTAAATGGAG 344428 || || |||||| || | | | |||| || | |||| | ||||| |||| Sbjct 2847 GATAACCCAAAGCTTTCAACTGTTGAGATATTTCATCTACCGTAACCCAAGTAAAGGGAG 2906 Query 344429 TTGCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATT 344488 |||||||||| | | || ||| ||| ||||||| ||| | | ||| ||||| || | Sbjct 2907 TTGCATCTCCTTCTCTTCCAGCAATGGCAGAAACTTTTCCTTGAAGACACTCAATCAACT 2966 Query 344489 GACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGG 344540 | || |||||||| || | || || | ||||| |||||||||||||| Sbjct 2967 GTCCAATCGTCATTCGACTAGGAATTGCGTGTGGATTGATAATAATATCAGG 3018 >seq85 Length=123598 Score = 98.7 bits (108), Expect = 8e-15 Identities = 201/295 (68%), Gaps = 3/295 (1%) Strand=Plus/Plus Query 344249 AATGGGTTTTAT-CTCCCACCATTTGTTTGAGACGTTGATAATATGTT-GGACCAATGAA 344306 |||| |||||| | | ||||| ||||| || ||||| ||||| || || ||||| || Sbjct 4901 AATGTATTTTATTCATCGACCATATGTTTTAGTCGTTGGTAATAAGTGAGGTCCAATAAA 4960 Query 344307 TATTTTAACTTCCATTCTTTGTCCCGTCATTCC-ATTATACATTGTTTCATTTCCCCATG 344365 ||| | |||||| | | || |||| ||| ||||||||| ||| ||| | Sbjct 4961 TATATGCGCTTCCAACGGTCGACCTGTCAATCCCATTATACATAAGTTCCCATCCACGAC 5020 Query 344366 CTTCATGTCCTAAAGCTACTAAATCATCATTAATTTTATTAATATTAACTCCTGTAAATG 344425 || || || |||||| || | | | |||| || | |||| | ||||| | Sbjct 5021 TTTGATAACCCAAAGCTTTCAACTGTTGAGATATTTCATCTACCGTAACCCAAGTAAAGG 5080 Query 344426 GAGTTGCATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTA 344485 ||||||||||||| | | || ||| ||| ||||||| ||| | | ||| ||||| | Sbjct 5081 GAGTTGCATCTCCTTCTCTTCCAGCAATGGCAGAAACTTTTCCTTGAAGACACTCAATCA 5140 Query 344486 ATTGACCTATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGG 344540 | || || |||||||| || | || || | ||||| |||||||||||||| Sbjct 5141 ACTGTCCAATCGTCATTCGACTAGGAATTGCGTGTGGATTGATAATAATATCAGG 5195 >seq103 Length=203287 Score = 95.1 bits (104), Expect = 1e-13 Identities = 93/118 (79%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 563282 TTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTG--TTTTCCGGC 563339 || |||| | |||||| || || | ||||||||| ||||| ||||| ||| || || Sbjct 14195 TTCCTTTTG-AATATTATAGTCCGACAGAGTTCTTCCGTCTTCGAGTTGCATTTCCCAGC 14253 Query 563340 AAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAAttttttgtttt 563397 ||| ||||| ||||| |||||||| || || |||||||||||||||| | |||| ||| Sbjct 14254 AAATATAAGCCTTTGTTGATCAGGGGGTATACCTTCTTTATCTTGAAATCTTTGATTT 14311 Score = 89.7 bits (98), Expect = 4e-12 Identities = 118/162 (73%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 930670 TTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCATTATTG 930729 ||||| || ||||||||||||||||||||| | ||||| ||| | || || ||||||| Sbjct 144012 TTTCTAGTCCGAATATTGCCAAAGAAATGCATGTGGGACACTTGAGATCAACTATTATTG 143953 Query 930730 GAGAATCTTTATGTAGATTATATGAATATTGTGG--AAGTAAAGTTCATCGAGTCAATCA 930787 |||| | | ||||| | ||| || | || || | | ||| | || |||| || Sbjct 143952 GAGATTGTATATGTCGCGTATTGGAGTTTTTAGGTCACGACGTGTTGA--GAATCAACCA 143895 Query 930788 TATTGGTGATTGGGGAACACAATTTGGTATGTTAATTGCTTA 930829 | || ||||||||||| || ||||| ||||| ||||| || Sbjct 143894 CGTGGGAGATTGGGGAACTCAGTTTGGAATGTTGATTGCGTA 143853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029289812512330