Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq103 91.5 1e-13 >seq103 Length=203287 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/225 (70%), Gaps = 10/225 (4%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTAC------CGTC-GAAACGGA 110325 |||||||||||||| ||||| || || || || |||| || ||| || || Sbjct 14396 ATGCAAATATTTGTGAAAACGTTGACAGGAAAGACCAGTAAGCCTAACGTTAGAGGTCGA 14337 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCC-GACAAAGAAGGCGTGCCCG 110384 ||| |||||| | | | || ||| |||||| | || |||||||| | ||| Sbjct 14336 ACCTTCGGATACTATAGAAAATGTGAAATCAAAGATTTCAAGATAAAGAAGGTATACCCC 14277 Query 110385 TGGATCAACAAAGACTTATTTATGCGGGTAAA--CAGCTGGAGGATGCCAGAACAATGGC 110442 ||||||||||| ||||| | ||| || ||| || || || || | ||||| || | Sbjct 14276 CTGATCAACAAAGGCTTATATTTGCTGGGAAATGCAACTCGAAGACGGAAGAACTCTGTC 14217 Query 110443 GGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAG 110487 ||| || || |||||||| ||||| ||||||||| |||| || || Sbjct 14216 GGACTATAATATTCAAAAGGAATCCACGTTGCACTTGGTATTGAG 14172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841011313681