Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq103 98.7 8e-16 >seq103 Length=203287 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/230 (70%), Gaps = 14/230 (6%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACG---GAGG-- 107610 |||||||| ||||| ||||| || ||||| || |||| || | |||| |||| Sbjct 14396 ATGCAAATATTTGTGAAAACGTTGACAGGAAAGACCAGTAAG--CCTAACGTTAGAGGTC 14339 Query 107611 ----CTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCC-GATAAAGAAGGCGTGCC 107665 || |||||| | | | || ||| ||||||| | ||||||||||| | || Sbjct 14338 GAACCTTCGGATACTATAGAAAATGTGAAATCAAAGATTTCAAGATAAAGAAGGTATACC 14279 Query 107666 CGTGGATCAGCAGAGACTTATTTATGCGGGTAAA--CAGCTGGAGGACGCCAAAACAATG 107723 | ||||| || || ||||| | ||| || ||| || || || |||| | ||| || Sbjct 14278 CCCTGATCAACAAAGGCTTATATTTGCTGGGAAATGCAACTCGAAGACGGAAGAACTCTG 14219 Query 107724 GCGGACTACAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATT 107773 ||||||| || ||||||||||| || ||||||||| |||| ||||| || Sbjct 14218 TCGGACTATAATATTCAAAAGGAATCCACGTTGCACTTGGTATTGAGGTT 14169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876231226613