Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq77 104 2e-17 >seq77 Length=161124 Score = 104 bits (114), Expect = 2e-17 Identities = 107/138 (78%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 33523 CCACCTCT-CAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| |||||| |||||||| || ||||| ||| ||||| |||||||| || || Sbjct 113589 CCACCTCTTCAAACGCAACACCAAGTGAAGAGTAGACTCCTTTTGAATGTTGTAGTCTGA 113648 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCA---AAAATCAAACGCTGCTGATCTTG 33638 ||| ||||| | || ||||| ||||| | || ||||||||||| ||||| ||| | Sbjct 113649 GAGAGTGCGACCATCTTCCAACTGTTTACTCCCATGCAAAATCAAACGTTGCTGGTCTGG 113708 Query 33639 CGGCACACCTTCTTTGTC 33656 || | |||||| ||||| Sbjct 113709 GGGAATACCTTCCTTGTC 113726 Score = 89.7 bits (98), Expect = 3e-13 Identities = 104/137 (76%), Gaps = 4/137 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTA-TGTTGTAATCGGA 33581 ||||| || | |||||| ||||| || ||||| ||| ||||| | ||||||| || Sbjct 114521 CCACCCCTTAGACGTAAGACCAAGTGGAGAGTAGACTCCTTTTGAAATGTTGTAGTCTC- 114579 Query 33582 GAGTGTGCGTTCGT--CGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGC 33639 ||| ||||| | | | ||||| ||||| || |||||||||||||| ||||| ||| | Sbjct 114580 GAGAGTGCGACCATACCTTCCAACTGTTTACCTGCAAAAATCAAACGTTGCTGGTCTGGG 114639 Query 33640 GGCACACCTTCTTTGTC 33656 || | |||||| ||||| Sbjct 114640 GGAATACCTTCCTTGTC 114656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328703531288640