Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq103 100 3e-16 >seq103 Length=203287 Score = 100 bits (110), Expect = 3e-16 Identities = 166/238 (70%), Gaps = 10/238 (4%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGA-------TCACGATCGAAGTCG 25226 ||||||| | ||||| ||||| || || ||||| | | | ||| | || |||| Sbjct 14397 CATGCAAATATTTGTGAAAACGTTGACAGGAAAGACCAGTAAGCCTAACGTTAGAGGTCG 14338 Query 25227 AAGCCAACGATACTATCGAGCAAGTAAAACAAAAAATTACC-GATAAAGAGGGTATACCG 25285 || | |||||||| || | || ||| ||| ||| | |||||||| |||||||| Sbjct 14337 AACCTTCGGATACTATAGAAAATGTGAAATCAAAGATTTCAAGATAAAGAAGGTATACCC 14278 Query 25286 CCCGATCAGCAAAGACTCATTTACGGCGGCAAA--CAACTCGAAGATGATAGAAATGTCA 25343 || ||||| ||||| || || | | || ||| ||||||||||| | |||| | | Sbjct 14277 CCTGATCAACAAAGGCTTATATTTGCTGGGAAATGCAACTCGAAGACGGAAGAACTCTGT 14218 Query 25344 GCGATTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || ||||||||||| |||||||| | || || || || || || || ||||| Sbjct 14217 CGGACTATAATATTCAAAAGGAATCCACGTTGCACTTGGTATTGAGGTTAAGGGGAGG 14160 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445093749049440