Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq58 84.2 1e-11 >seq58 Length=124683 Score = 84.2 bits (92), Expect = 1e-11 Identities = 137/196 (70%), Gaps = 5/196 (3%) Strand=Plus/Minus Query 23629 ACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGAAATATTA 23688 || || || || || || || ||| | |||||||| | | |||||| |||||| || Sbjct 62787 ACACTTACTGGCAAGACCATTACTTTGGAAGTTGAGCCTTCCGACACTATTGAAAACGTA 62728 Query 23689 AAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCC 23748 || ||||| ||||| || || | || || |||||||||||||| |||||||| Sbjct 62727 AAGTCCAAAATACAAGACAAGGAGGGAATTCCTCCCGATCAACAGCGTTTGATATTTGCA 62668 Query 23749 GGCAAACAACTGGAAGA---CG--AACGCACTTTAGGCGATTACAACATACAAAAAGAGT 23803 ||||| ||| ||||||| || | | ||| || || || || |||||||| || | Sbjct 62667 GGCAAGCAATTGGAAGAGCTCGTAGAAGAACTCTATCGGACTATAATATACAAAAGGAAT 62608 Query 23804 CCACATTACATTTAGT 23819 | || || || || || Sbjct 62607 CTACCTTGCACTTGGT 62592 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338009118019436