Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Galdieria_20sulphuraria_20[genbank_20GCA_5F001704855.1_202016-08-14] 117 sequences; 12,093,695 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq77 118 8e-22 >seq77 Length=161124 Score = 118 bits (130), Expect = 8e-22 Identities = 171/235 (73%), Gaps = 6/235 (3%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGA--TGTTGTAA 44164 |||||| || ||||| | || |||| |||||| || ||||||||| | ||||||| Sbjct 114287 CATTCCACCCCTCAGACGTAAGACCAAGTGAAGAGTAGACTCCTTTTGAAGCTGTTGTAG 114346 Query 44165 TCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCT 44224 || |||| || | | |||| ||| ||||| ||||| |||||||| || || ||| Sbjct 114347 TCT-CGAGAGTACGACCATGCTCCAACTGTTTCCCAGCAAA-ATCAAACGTTGTTGGTCT 114404 Query 44225 GAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAA-TGTTCCTATGGTGTCGGCGGA 44283 | || | ||||||||| || ||||||| ||| || | || | || ||||| | || Sbjct 114405 GGGGGAATACCTTCCTTGTCTTGTATCTTCGACTTAAAGTTTTTCAATAGTGTCTGAGGG 114464 Query 44284 TTCCACCTCCACCGTAA-TCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||||| || | |||| | ||||| || || || ||||||||||| |||||||| Sbjct 114465 CTCCACTTCAAGAGTAAATGGTCTTCCCAGTAAGAGTCTTCACGAATATTTGCAT 114519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359989886676189