Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq2 134 1e-26 >seq2 Length=333263 Score = 134 bits (148), Expect = 1e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| ||| ||||| | || || || |||| Sbjct 298299 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCGTCACCCTTGAGGTTGAGCCCACA 298358 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||||| || || | ||||| ||||| ||||| | || ||| Sbjct 298359 GATACCATAAACAACATCAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 298418 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || ||||||| | | ||||| ||||| || ||| | ||||||||| | |||||| | Sbjct 298419 CAGCGCCTCATCTTCTCCGGCAAGCAGCTCGAGGACAATCGCACCCTCCAGGACTACTCC 298478 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||| |||||||| || || || Sbjct 298479 ATCCAGAAGGATGCCACGCTCCACCTCGT 298507 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217660782640