Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 4e-12 >seq2 Length=333263 Score = 86.0 bits (94), Expect = 4e-12 Identities = 139/194 (72%), Gaps = 6/194 (3%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTC--GGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGA 34256 || ||||| ||| |||||| ||| | || || | ||| || | ||||||||| | || Sbjct 298489 TCCTTCTGGATGGAGTAGTCCTGGAGGG-TG-CGATTGTCCTCGAGCTGCTTGCCGGAGA 298432 Query 34257 AAATGAGCCGCTGCTGGTC-GACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGA 34315 | ||||| |||||||| || | |||| | | ||||||||| ||||| ||| | Sbjct 298431 AGATGAGGCGCTGCTGATCTGGCGGG-ATTCCCTCCTTGTCCTGGATCTTCGCCTTGATG 298373 Query 34316 TCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTC 34375 | | ||| | ||| || | || || || | |||| ||| |||||||||||||| || Sbjct 298372 TTGTTTATGGTATCTGTGGGCTCAACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTG 298313 Query 34376 ACAAAGATCTGCAT 34389 || ||||||||||| Sbjct 298312 ACGAAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323071058951840