Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq2 105 6e-18 >seq2 Length=333263 Score = 105 bits (116), Expect = 6e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 131044 TCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAG 131103 ||||| || ||| ||| || | |||||| |||||| ||||||||||| | | || Sbjct 298489 TCCTTCTGGATGGAGTAGTCCTGGAGGGTGCGATTGTCCTCGAGCTGCTTGCCGGAGAAG 298430 Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGC 131163 || | |||||||| || || |||||||| || ||||| ||| ||| ||||| | Sbjct 298429 ATGAGGCGCTGCTGATCTGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTG 298370 Query 131164 TCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACG 131223 | | ||||| |||| ||| | || | ||| ||||| || ||||| ||||| || ||| Sbjct 298369 TTTATGGTATCTGTGGGCTCAACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACG 298310 Query 131224 AAAATCTGCAT 131234 || |||||||| Sbjct 298309 AAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472011389861760