Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 8e-16 >seq2 Length=333263 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||| | ||||| || || ||||| ||||| || || |||| Sbjct 298299 ATGCAGATCTTCGTCAAGACTCTCACCGGCAAGACCGTCACCCTTGAGGTTGAGCCCACA 298358 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||||| | || | ||||| || || || ||||||||||| || || || ||||| Sbjct 298359 GATACCATAAACAACATCAAGGCGAAGATCCAGGACAAGGAGGGAATCCCGCCAGATCAG 298418 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || ||||||| ||| | ||||| | |||||| || || ||| | Sbjct 298419 CAGCGCCTCATCTTCTCCGGCAAGCAGCTCGAGGACAATCGCACCCTCCAGGACTACTCC 298478 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || |||| Sbjct 298479 ATCCAGAAGGATGCCAC 298495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726777411035