Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Giardia_20intestinalis_20[genbank_20GCA_5F000498715.1_202013-11-25] 239 sequences; 10,703,894 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq2 111 3e-19 >seq2 Length=333263 Score = 111 bits (122), Expect = 3e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 ||| || || || || ||||| | || | ||| ||||||| || || |||||| || Sbjct 298532 TTAGTTACCACCACGGAGGCGGAGGACGAGGTGGAGCGTGGCATCCTTCTGGATGGAGTA 298473 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 || ||| || | || || | |||||| |||| ||| ||||| | || || || Sbjct 298472 GTCCTGGAGGGTGCGATTGTCCTCGAGCTGCTTGCCGGAGAAGATGAGGCGCTGCTGATC 298413 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || || || || |||||||| || ||||| ||||||| | | ||||| |||| | Sbjct 298412 TGGCGGGATTCCCTCCTTGTCCTGGATCTTCGCCTTGATGTTGTTTATGGTATCTGTGGG 298353 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||| ||| || || ||||| ||||||||||| |||||||| Sbjct 298352 CTCAACCTCAAGGGTGACGGTCTTGCCGGTGAGAGTCTTGACGAAGATCTGCAT 298299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921619646653080